Chitinophaga pendula: KTO58_22695
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Entry
KTO58_22695 CDS
T08407
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
chf
Chitinophaga pendula
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Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_50
AAA_2
HTH_30
Mg_chelatase
HTH_28
bpMoxR
AAA_16
HTH_1
P-loop_TraG
HTH_29
nSTAND3
HTH_AsnC-type
nSTAND6
AAA_14
MCM
DUF815
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UCJ06451
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Position
6107227..6108573
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AA seq
448 aa
AA seq
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MSTMLPGKILIVDDDVDVLRAARLLLKRHFEQVDFEKNPQKIPYLVTNFDYDVILLDMNF
TRDLSSGKEGFEWLDRILDIKPDMAVVLFTAYGDVEMAVRAIKAGAVDFVLKPWENDKLL
ATIQTAYNKKNNTTVTKEAPQSQSQTTLIGNSPAMMQVMDTVARVAGTDANVLILGENGT
GKDLLARHIHQLSLRNQKTFVSVDLGAISESLFESELFGHVKGAFTDAREDRIGRFEEAA
EGTIFLDEIGNISLPFQAKLLTVLQNRYVTKVGSNKNIPINVRLICATNRDIVQMTAQHQ
FRQDLLYRINTIEINLPPLRERIEDIVPLAEHFLQVYREKYKRPVTSLHESLLVPLRQYD
WPGNIRELQHAIERAVILAQGRSLQPKDVFLKSASAGQALNTGYNLEEMERNMIHQAMKK
CNGNITEAARELGLSRAALYRRLEKYNI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaatgttaccgggaaaaatactgatagtagatgatgatgtagatgtattacgc
gccgccagactgctattaaaacgacatttcgaacaggtagacttcgaaaagaatccacaa
aaaataccatacctcgtcaccaacttcgactacgatgtcatcctcctcgacatgaacttc
acccgcgacctcagcagcggaaaagaaggcttcgaatggctcgaccgtatcctcgatata
aaaccggacatggcagtagtactgttcaccgcatacggcgacgtcgaaatggccgtaagg
gccatcaaagcaggggcagtcgatttcgtactcaaaccctgggaaaacgataaactcctg
gcaaccattcaaaccgcttataataagaagaataacaccaccgtcaccaaagaagcacca
caaagccagtcccagacaacactcatcggcaacagccctgccatgatgcaggtcatggat
accgtcgcccgcgtcgcaggcacagatgccaatgtactcatcctgggagaaaatggtacc
ggtaaagacctcctcgccagacatatccaccagctctccctccgcaatcaaaaaacattc
gtcagcgtcgacctcggcgccatcagcgaatccctcttcgaaagcgaactgttcggccac
gtcaaaggcgccttcaccgatgcccgcgaagacagaatcggccgcttcgaagaagccgcc
gaaggcaccatcttcctcgacgaaataggaaatatcagcctcccattccaagccaaatta
ctcaccgtactgcaaaacagatacgtcaccaaagtaggctccaataaaaatatcccaatt
aacgtccgcctcatctgcgccaccaaccgcgatatcgtccagatgaccgcacaacaccag
ttccggcaggatctcctctatcgtatcaacaccattgagatcaacctgccaccactacgc
gaacgcatcgaagatatcgtccccctcgccgaacacttcctccaggtataccgcgaaaaa
tataaacgcccggtcacctccctacacgaatcactgctcgtaccactacgacaatacgac
tggcccggaaatatccgcgaactccagcatgccatagaacgcgccgtaatactcgcccag
ggaagatcactccaacccaaagacgtattcctgaaaagcgcctccgccggacaagcactc
aacaccggatataacctcgaagaaatggaacggaatatgatccatcaagccatgaaaaaa
tgtaatggcaacatcacagaagctgcccgcgaattaggcctcagcagagcagccctatat
agaagactggaaaaatataatatatag
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