Chitinophaga pendula: KTO58_22775
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Entry
KTO58_22775 CDS
T08407
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chf03032
]
KTO58_22775
03036 Chromosome and associated proteins [BR:
chf03036
]
KTO58_22775
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_22775
DNA replication proteins [BR:
chf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KTO58_22775
Chromosome and associated proteins [BR:
chf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KTO58_22775
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KTO58_22775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
UCJ06467
LinkDB
All DBs
Position
complement(6124234..6124521)
Genome browser
AA seq
95 aa
AA seq
DB search
MRKADLINNIAEKTGIPKVDVLVTLEAMFKEVKEALANGEHIYIRGFGSFITKKRAAKIG
RNIKKNVAVEIPEHFIPAFKPSKEFVAEVKKLKSS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagctgatttgattaacaacattgctgaaaaaaccggcatccccaaagtagat
gtgttagtaacgctcgaggccatgttcaaggaggtcaaggaggcattggcgaatggcgaa
cacatttacatccgtggatttggcagttttattactaagaaacgcgcagccaagataggc
cggaacattaagaagaatgtagctgtggagatccccgagcacttcattcctgcttttaag
ccatctaaagaatttgttgcagaagtaaagaagcttaaaagttcttaa
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