Chitinophaga pendula: KTO58_23045
Help
Entry
KTO58_23045 CDS
T08407
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chf
Chitinophaga pendula
Pathway
chf03420
Nucleotide excision repair
chf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KTO58_23045
03430 Mismatch repair
KTO58_23045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_23045
Enzymes [BR:
chf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KTO58_23045
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KTO58_23045
MMR (mismatch excision repair)
Other MMR factors
KTO58_23045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF3799
CSF-1
AAA_11
KH_TffA
TPR_2
TPR_1
Motif
Other DBs
NCBI-ProteinID:
UCJ06519
LinkDB
All DBs
Position
6179823..6182990
Genome browser
AA seq
1055 aa
AA seq
DB search
MSRESQQYQSRFKDVYEKLNAQQREAVDNTEGPIMVIAGPGTGKTQILASRIGKILQDSD
FMPQNILCLTYTDAGTVAMRKRLTDFIGPDAYRVNIHTFHSFCNEVIQDNLGLFEKTSLD
PISELEKIQLLKKLIDGFGKDNPLKRYRGDVYFDMKNLTSLFSAMKREGWTVAYIKDCIR
AYLDSLPTREEYICKRATKNFKKGDIRTDKIEIEQEKMARLQAAVEQFDVFQSLMHAANR
YDFDDMINWVIRAFQQHPNLLADYKERFQYILVDEYQDTSGTQNQLIRLLIDGEELPNVF
VVGDDDQSIYRFQGANVENMEQFASSFVDTLRTIVLTQNYRSVQNILDISMALIDNNGNS
RLVNQLPGLSKQLKASNSHLVPLDIPPAIHRYDTPRDEMAGITLTVAKLLEQGVPAGKVA
VIYRENRYGEELAQYFRLKGLPFYSKRNINLFEVPFARKVLTLMRYVACELDTPYSGDDL
LFSIMHYDFYNIPGIEAARISIKVAEKGYQEKTSIRQYLQEWQTTRNLSLFTSAPDEALI
ALSKMLETWIREAHNLTLQQLFASMIQEGGIMAHIMESPEKIWLMKVLQALFDFIKEETR
RNPDLNITAFMEMVDLMENNKIPIPLVQVSGNEKGVNLITAHGSKGLEFEYVFMAGTNSH
VWEKKRKNNSGFVFPDTVFSTQATSTDEQELRRLFYVAITRAEKYLYISYPEHKQDGKQL
EPSMFLTEISEQHILPNEKITHSEETMFDFELLNYSKNQAPEIARIDQLFVEAMLGNFVM
NVTALNNYLDCPLGFFYKNLVRVPTGRSENTEFGSAVHFAVEKLFQKMQEDPANAFPSKE
AFIRDFTWSMLRNRECFTRESFERRMEYGKDILNSYYDTYIHSWNKIVSVERNIRNVIIK
GVPIKGKVDKLEFEGSQVNVVDYKTGDYEKAIKDYRKFDRPNERHPHGGDYWRQAVFYKI
LLDNYKQRNWQVVSTEFDFIEPNKQKLYHKEKVVITPEDMTTVTEQIVDTWERIQRYDFY
TGCGKEDCPWCNFVKDNKLHIALHDLEDEEPEARF
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgaatcacaacaatatcagagccgtttcaaagatgtgtatgaaaagctgaat
gcacaacagcgggaagcagtagataatacggaaggcccgatcatggtgatcgctggtccc
ggtactggtaaaacacagatactggcatcacgcatcggtaagatccttcaggactccgat
ttcatgccccagaacatattgtgcctcacctacaccgatgcaggcaccgtagccatgcgt
aaacggcttactgacttcataggccccgatgcctatcgggtcaatatccacacgttccac
tccttctgcaatgaggtcatccaggataatctcggtctttttgaaaagacatccctcgac
cccatatcagaactggaaaagatccaattattaaagaaactgatcgatggcttcggaaaa
gacaacccactcaaaagataccggggtgacgtctatttcgatatgaaaaacctgacctcc
ctcttttccgctatgaaacgggaaggctggaccgtcgcatacataaaggattgtatccgg
gcttatctcgatagcctccccaccagggaagaatatatctgtaaacgggccactaaaaat
tttaagaaaggagatatccgcacagataaaattgagatcgaacaggaaaaaatggcacgc
ctgcaggccgctgtagagcagtttgatgtattccagtcactgatgcacgcggccaatcga
tacgacttcgatgatatgatcaactgggtgatcagggcctttcaacagcaccctaacctc
ctggccgattacaaagaacgctttcaatacatcctggtagatgaataccaggataccagc
ggtacacaaaaccagctgatccgcctgctgatagatggagaagaactgcccaatgtattc
gtagtaggagacgacgatcaatctatctaccgtttccagggcgccaacgtggaaaacatg
gaacagttcgccagtagcttcgtagatacgctccgcaccatcgtactcacacagaactac
cgctcggtgcagaatatccttgatatctccatggctctcatcgacaataatggcaactcc
cgtctggtcaaccagctacctggcctcagcaaacaactcaaagccagcaatagccacctg
gttcctctcgacatacctccggccatacatcgttacgatactccccgggacgaaatggca
ggcattacactcactgtcgccaaactactggaacaaggcgtgccagccggcaaggtcgct
gttatctatcgcgaaaaccggtatggagaagagctggcccaatacttccgcctgaaagga
ttgcccttttattccaaacggaatatcaacctcttcgaagtccctttcgctcgtaaagta
ctcaccctgatgcgatatgtcgcctgcgaactggatactccctacagcggcgatgacctc
ctgttcagcatcatgcactacgacttctataacatccctggtatagaagccgctcgtatc
agcatcaaagtagcggaaaaaggttaccaggaaaagacctccatccgccaatacctgcag
gaatggcaaaccacccgcaacctgtcattatttacctccgctcccgatgaagctctcatc
gccctcagtaaaatgctggaaacctggatacgggaagcgcataacctcaccctgcaacag
ctattcgccagcatgatacaggaaggaggtattatggcccatatcatggagtctccagag
aaaatatggctcatgaaagtattgcaggcactattcgacttcatcaaagaagaaacccgc
cgcaatcctgatctcaatataacggcctttatggaaatggtcgacctgatggaaaacaat
aaaattcctatccccctggtacaggtctccggcaacgaaaaaggcgtcaatctcatcacc
gcacatggctccaaaggactggagtttgaatatgtgttcatggcaggtaccaactcccac
gtgtgggagaaaaaacggaagaacaacagcggctttgtattcccggataccgtattctcc
acacaggccacctctacggacgagcaggaattacgccgcctattttacgtagccatcacc
cgggcagaaaaatacttgtatatcagctacccggaacacaaacaggatggcaaacagctg
gaaccaagcatgttccttaccgaaataagcgaacagcatatactgcccaatgaaaagatc
acccattcggaggagaccatgttcgacttcgaactactcaattactcgaaaaaccaggcg
cccgagattgcccgtattgaccagctcttcgtagaagccatgctgggcaacttcgtgatg
aacgtgaccgcacttaataactacctcgactgccccctgggcttcttctataaaaacctg
gtccgcgtccctaccggccgttcagagaacacagagttcggctctgcagtacacttcgca
gtagagaaactgttccagaaaatgcaggaagaccccgccaacgccttcccttccaaagaa
gcattcatccgcgactttacctggagcatgctacgcaatcgcgaatgttttacccgggaa
tcctttgaacgtaggatggaatacggaaaggatatcctcaatagctactacgatacctat
atccacagctggaataagatcgtcagcgtagaaaggaacatccgtaatgtgatcatcaaa
ggagtaccgatcaaaggcaaggtggataaactggaatttgaaggtagccaggtcaacgta
gtagattataagacgggcgactacgaaaaggcaatcaaagactaccgcaaattcgaccgc
ccaaatgaacgccacccccatggaggcgactattggcggcaagccgtgttctataaaata
ttgctggacaattacaaacaacggaactggcaggtcgtaagtacagaattcgactttata
gaacccaataaacaaaagctatatcacaaagagaaagtagttatcaccccggaagacatg
accaccgttacggaacagatcgtagatacctgggaacgcatccagcgatatgatttctat
accggctgcggcaaagaagactgcccctggtgtaacttcgtgaaggataataagctgcat
atcgccctgcacgacctcgaagacgaagaaccggaagcccggttttga
DBGET
integrated database retrieval system
