Chitinophaga pendula: KTO58_23070
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Entry
KTO58_23070 CDS
T08407
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chf
Chitinophaga pendula
Pathway
chf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTO58_23070 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_23070 (xth)
Enzymes [BR:
chf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KTO58_23070 (xth)
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KTO58_23070 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UCJ06524
LinkDB
All DBs
Position
6190258..6191019
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AA seq
253 aa
AA seq
DB search
MRIVSYNVNGLRSAMTKGFTEWLQTDPADIICLQEIKAQQENVDFQQFDKLGYLHYWYPA
QKKGYSGVAVLTRIKPDFVQYGNGFMQSDAEGRVIRLDFGDITLINTYIPSGTSGDDRQT
YKYQWLDEFFGYLAELRKTRPNLIVCGDYNICHKPIDIHDPVGNKNSTGFLPEERAWMDK
LFENGFIDTFRRYNPEPHQYSWWSFRANARNNNKGWRIDYINVTEPLSERLKGAQIWQQV
KHSDHCPVYLELV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgtatcttacaatgtgaatggtctccgctcggccatgacgaaaggttttacc
gaatggctgcaaacagatcccgcagatatcatctgcctgcaggaaataaaagcacaacag
gaaaatgtagacttccagcaattcgacaaattaggctacctgcactactggtaccccgcc
cagaaaaagggctacagcggtgtagcagtgttgacccgtatcaaacccgacttcgttcaa
tatggtaatggcttcatgcaaagcgatgcggaaggccgcgttatacgcctcgatttcggc
gatatcacgctgatcaatacctacatcccctccggcaccagcggagacgacaggcaaacc
tataaataccaatggctggatgagttctttggatacctggccgaactacgcaaaaccaga
cccaatctcatcgtttgcggagactataacatctgccacaaacccatcgatatccacgat
cctgtcggtaataagaactccaccggcttcctccccgaagagagagcctggatggataaa
ctcttcgaaaacggctttatcgacaccttccgccgatataatcccgaaccacaccagtac
agctggtggagcttccgggccaatgccaggaacaataataaaggctggcgcatcgactat
atcaacgtcaccgaacccctgtccgaacgtcttaaaggcgcccagatatggcaacaggtg
aaacactctgatcactgtcccgtatacctcgaattggtataa
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