Chitinophaga pendula: KTO58_23140
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Entry
KTO58_23140 CDS
T08407
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_23140 (radA)
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KTO58_23140 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA_24
AAA
AAA_16
NTPase_1
DEAD
DZR
SLFN-g3_helicase
DUF7125
AAA_5
HypA
DUF7129
ABC_tran
nSTAND3
RUBY_RBDX
Ima1_N
zf-RING_10
zf-C3HC4_2
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
UCJ10335
LinkDB
All DBs
Position
6204737..6206107
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AA seq
456 aa
AA seq
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MSKIKTAFFCQNCGYEAAKWNGRCPSCGQWNTFVEEKIQKEIPLRQQEWKNETTAKTDKT
VHLSEVSGAAEERWQTADAELNRVLGGGIVTGSLVLVGGEPGIGKSTLFLQNALLLQNIT
TLYVSGEESAQQIKMRADRLKTKNERFYLLTETSTQTIFQEIKKLQPQLVIIDSIQTLQS
PFIESAPGSVSQIKESAAEMQRFAKETNTPVFLIGHITKDGTIAGPKILEHMVDTVLQFE
GDQHYAYRILRTIKNRFGSTAELGIYEMTGEGLRQVTNPSEILISQREDELSGVAIASTM
EGMRPMLIEVQALVTQSVYGTPQRTATGFDLRRLQLLLAVLEKRGGFHFGVKDVFLNIAG
GIRVEDPSIDLAVLCALLSSYEDIAVSSKICFAGEVGLSGEIRAVNRIEQRIAEAEKLGF
ERIFISRYNKKGVDFSRFNIDVISVGRVEEVYQKLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaataaaaacagcctttttttgtcagaattgtggctatgaagcagctaaatgg
aacggccgttgccctagctgcggacaatggaacaccttcgtagaagaaaagatccagaaa
gaaataccactgcgtcaacaagaatggaaaaacgaaacaactgccaaaacagataaaacc
gtacacctctccgaagtaagcggcgcagcagaagaaagatggcagactgccgacgcagag
ctgaaccgcgtactgggtggtggcatcgtcaccggctccctcgttctcgtaggcggagaa
cccggtatcggcaaatccacattattcctgcaaaacgccttgctactgcaaaatatcacc
accctctacgtcagcggagaagaaagcgcacaacaaataaagatgcgcgcagatcgtctc
aaaaccaaaaacgaacgcttctacctgctcaccgaaacctctacccaaaccatcttccaa
gaaataaaaaaattacagccacaactggtcatcattgactccatacaaaccctacagtcc
ccctttattgagtcagcaccaggcagcgtatcccagataaaggaatccgccgccgaaatg
caacgtttcgccaaagaaactaatacccccgtattccttatcggccacatcactaaagat
ggcaccattgctggtcctaaaatacttgaacatatggtagacaccgtcctccagttcgaa
ggagaccaacattatgcctatcgcatactacgtactatcaaaaaccgattcggatccaca
gcagaactaggtatatacgaaatgaccggagagggcctcagacaggtaaccaacccctct
gaaatcctcatctcccaaagagaagatgaactgagtggtgtcgccatcgcctccaccatg
gaaggcatgcgccccatgctgatcgaagtacaggccctcgtcacacaatctgtatacggt
accccgcaacgtaccgctaccggcttcgacctccgtaggctacaactgctactggccgta
ctcgaaaaaagaggtggattccatttcggcgttaaagatgtattcctcaatatagccggc
ggcatcagagtagaagatccctctatcgatctagctgtcctctgcgcgctcctctcctct
tatgaagatatcgccgtctccagcaaaatatgctttgcgggagaagtaggacttagcgga
gaaatccgagctgtcaaccggatcgaacaacggatcgcagaagcagaaaaactaggcttc
gaaaggatcttcatctcccggtataataagaaaggggtagacttcagccgtttcaatata
gacgtgatctccgtaggccgggtagaagaagtataccaaaaactgttctaa
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