Chitinophaga pendula: KTO58_25805
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Entry
KTO58_25805 CDS
T08407
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chf03032
]
KTO58_25805 (gyrB)
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_25805 (gyrB)
Enzymes [BR:
chf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KTO58_25805 (gyrB)
DNA replication proteins [BR:
chf03032
]
Prokaryotic type
DNA Topoisomerases
KTO58_25805 (gyrB)
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KTO58_25805 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UCJ07042
LinkDB
All DBs
Position
complement(6855512..6857494)
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AA seq
660 aa
AA seq
DB search
MSEELAQTTTNPSNGYDAGSIQILEGLEAVRKRPAMYIGDIGIKGLHHLVYEVVDNSIDE
ALAGYCKNIEVTICEDNSIRVRDDGRGIPTGIIPKENRSALEVVMTVLHAGGKFDKNTYK
VSGGLHGVGVSCVNALSSQVHVTVQREGKIFEQEYRRGIPQYPVREIGDSELTGTTTHFR
PDNEIFKETTYNREILASRLRELAYLNRRINITLTDEREKDDNGTFLQEIFYSEGGIREF
VQMLDKNSRRNPLLPHPIFIEAHDDAANVEVEVALVYNDSFNENIFSYVNNINTIEGGTH
VAGFRRAITRVFKSYGDKNKLFEKSKIEVTGDDFREGLSAIISVKVPEPQFEGQTKTKLG
NSDVMGVVDSAVANVLESYLEEHPKEAKTVINKVVLAAQAREAARKARQMVQRKSVMSGS
GLPGKLADCSDNDPQKCELYLVEGDSAGGTAKQGRNRNFQAILPLRGKILNVEKAMEHKI
YESEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRY
MKAMVEQGYVYIAQPPLYLVKKGKEQIYAWTEEQRKAAIAKLAGAGKEDSVNVQRYKGLG
EMNAEQLWDTTMNPENRTLKQVTIESAAEADRIFSMLMGDEVPPRREFIESHAKYAKIDA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaattagcgcaaactaccactaacccgagcaacggatatgatgctgggagc
atacagatattggaaggactcgaagctgtgcgtaagcgtcctgcgatgtacatcggtgat
atcggcattaaaggtttacaccacctggtatacgaggtagtcgacaactccatcgatgaa
gcgctagctggttactgtaaaaacattgaagttacaatttgtgaagataactctatccgt
gtaagggacgacggacgtggtatcccaactggtattataccaaaagaaaaccgttctgca
ctggaggtagtaatgaccgtgctacacgccggtggtaagttcgacaagaatacttacaaa
gtgtccggtggtttgcacggggtgggtgtaagttgtgtgaatgcactgagcagccaggta
catgttaccgtacaaagagaaggaaaaatatttgaacaagaatatagaagaggtatccct
cagtatcctgtacgcgagatcggagattctgaactcacgggtacgactacgcatttccgc
ccggataatgaaatatttaaagagactacctataaccgggaaatcctggccagccgcctt
cgtgaactggcttacctgaaccgtcgtatcaacatcacccttacggatgaacgtgaaaaa
gatgataatggtaccttcctgcaggaaatcttctatagtgaaggtggtatcagggagttc
gtgcagatgctggacaaaaacagccgtcgtaatcccttgctgcctcatcctatcttcatt
gaagcccacgacgatgcagccaatgtagaagtggaagtagccctggtatacaacgactcc
ttcaatgagaacatattctcttacgttaataatatcaatacgatagaaggtggtacgcac
gtagcaggtttccgaagggctatcacccgtgtattcaaatcttatggcgataagaacaaa
ctgtttgagaaatctaagatagaagtaacgggagatgacttccgggaaggtctcagcgct
atcatcagcgtaaaagtacctgagcctcaatttgaaggacagaccaaaaccaaactcggt
aactccgatgtaatgggggtggtagacagcgccgtagctaacgtattggagtcctacctg
gaagaacatcctaaagaagccaagaccgtcatcaataaagtggtattggcggcacaagcc
cgtgaggcagcccgtaaagcccgtcagatggtacagcgtaagagcgtgatgtccggtagc
ggcttacccggtaaactggcagactgctccgacaacgaccctcaaaaatgcgagttgtac
ctggtagagggtgattcggcaggtggtacggccaaacaaggacgtaaccgtaacttccag
gccatcctcccgctgcgtggtaagatcctgaacgtggagaaagccatggaacacaagatc
tacgaaagtgaggagatcaaaaatatcttcaccgcgctgggagtaactatcggtaccgaa
gaagatgacaaagcactgaacttaagcaagttaagatatcacaagctgatcatcatgacg
gatgccgacgtggatggcagccacatcgccacactgatcctgacattcgtattccgttat
atgaaagcgatggtagaacaaggctatgtatacatcgcacagcctcctttatacctggtt
aaaaaaggcaaggagcagatatacgcctggacagaagaacaacgtaaagcagctatcgcc
aagctggcaggcgccggtaaagaagatagtgtaaacgtacagcgttataagggtcttgga
gagatgaatgcagagcaactttgggatactactatgaaccctgagaaccggaccttgaaa
caggtaactattgaaagcgccgcagaagccgatcgcatcttcagcatgctgatgggtgac
gaagtacctccccgccgcgaattcattgaatctcatgctaaatacgccaagattgatgca
taa
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