Chitinophaga pendula: KTO58_28325
Help
Entry
KTO58_28325 CDS
T08407
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chf
Chitinophaga pendula
Pathway
chf03030
DNA replication
chf03430
Mismatch repair
chf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTO58_28325
03430 Mismatch repair
KTO58_28325
03440 Homologous recombination
KTO58_28325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chf03032
]
KTO58_28325
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_28325
Enzymes [BR:
chf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTO58_28325
DNA replication proteins [BR:
chf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KTO58_28325
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KTO58_28325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_14
AAA_22
AAA_5
AAA_30
AAA_19
AAA_24
DNA_pol3_delta
AAA_2
AAA_18
Rad17
AAA_7
RNA_helicase
AAA_33
nSTAND3
Mg_chelatase
AAA_16
NTPase_1
Sigma54_activ_2
SRP54
Motif
Other DBs
NCBI-ProteinID:
UCJ07520
LinkDB
All DBs
Position
complement(7487263..7489260)
Genome browser
AA seq
665 aa
AA seq
DB search
MENFIVSARKYRPQNFSTVVGQAHITTTLKNAIRNNQLAHAFLFCGPRGVGKTTCARILA
KTINCEHLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFSPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVDHLQEICQKEHIQAEPDALHLVAQKTDGCMRDSLSTLDKIVSFTAGHLTYQNTL
EHLNILDYDYFFRVMDSVLQQDVAGALLLFDEILQKGFEGDNFLNGWAEFLRNLLLCKED
RVHHLVEVSGNLKDRYKQLSGKVSPAYLVTALHLLNETEINYRQARNKRLHVEMALIKLC
YLQQAVTLVADDQSGEVVKKKLVADGAAPQKLRTSFSQPAAAKPTTGAPATTETIAQQEA
RLTIETTTTQATTPPAAAAPAVPATPAVTAPAPAANNPAPPPPPKATPVTPVAAPAVVPA
APVSAPATAMPSPVSTPVASTAATAAAKTAAPAAGKMTGLAAMKEAMAAKQQVSEAVQRV
ALTLGALHVYWEEFIDTFRQANKMTVVSNLQLATLKLLGAEEIGIVSRNIVQFRFMEEEK
LAISDFFKKKFHNHSLILTLQLDESQQVQDIGPAPLSSREQFQQMAEKYPLVKELKDKLN
MELDF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttatagtttctgcgcgtaagtaccgcccccagaatttctcgacagtggta
gggcaggcccatattaccactactttaaagaatgccatccggaacaatcagctggcgcat
gcctttctgttctgtggaccgaggggggtgggtaaaacgacctgtgcccgtatattggcc
aagaccattaactgtgagcatttgcagccggatggggaggcttgtaatcaatgtcattcc
tgtacttccttcaatgaggggagttcattcaatattcacgagctggatgctgcgtctaac
aactcggtagatgatatccgcaccctggtagagcaggtacggttctctccgcaggcgggc
aagtacaagatctatatcatcgatgaggtacacatgctcagttcttcggcattcaatgct
ttcctgaagacgctggaggagcctccttcctatgctattttcattttagcgactactgaa
aagcacaagatattacctacgatcctgagtcgttgtcagatatttgatttcaaacgtatc
acgatacaggataccgtagatcatctgcaggagatctgccagaaagagcatatacaggcg
gagcctgatgcgttgcacctggtggctcagaagacggatggttgtatgcgtgactctctg
agtacgttggataagatcgtgagttttacggcgggacatcttacgtaccagaataccctg
gagcatctgaacatactggattatgattatttcttccgggtgatggacagtgtattgcaa
caggatgtggcgggtgcgttgttgttgtttgacgagatattacagaaaggttttgaaggt
gataacttcctgaatggttgggcggagtttctgcgtaacctgttgttgtgtaaggaagac
cgggtgcatcacctggtggaggtatctggtaatctgaaggaccggtacaagcagttgtcg
gggaaggtgagtccggcttacctggttacggcgttgcatttgctgaatgagacggagatc
aactaccgtcaggcgcgtaataagcgactgcatgtggagatggcgttgatcaaactttgt
tatctgcagcaggcggtgacgttggtggcagatgatcagagcggagaggtggtaaaaaaa
aaactggtagctgacggtgctgctcctcagaaattaagaacctctttttcacagccggcg
gcggccaagccgactaccggtgctccggctactacggagacgatcgctcagcaggaagcc
cggctgacgatagaaacgactactacgcaggctactactccccctgcggcggcggctccg
gcagttcctgctacaccggcagttacggcccctgcccctgctgctaacaatccggcccct
cctcccccacccaaagcgactcctgttactcctgttgctgcacctgctgtggtgccggct
gcgcctgtgtctgcaccagcgacggcaatgcctagtccagtatcgaccccggtggcatcg
actgctgctactgcggcggcgaagacagcggcacctgctgcgggtaagatgaccgggctg
gcggcgatgaaagaagcgatggcggcaaaacagcaggtatcggaagcggtacagcgggtg
gcattgacgttgggggcattgcatgtatactgggaggagttcatcgatactttccggcag
gccaacaagatgacggtggtaagtaacttgcaactggcgacgttaaagctgctgggggca
gaagagatcggtattgtaagccgtaatattgtgcagttccgttttatggaagaggagaag
ctggccatttctgatttctttaagaagaagtttcacaatcactcactcatattaaccctg
cagttggatgagagccaacaggtacaggatataggtcctgcgccgttgtccagcagggag
cagttccagcagatggcggagaaataccccctggtgaaggagctaaaggacaagctgaat
atggaactagatttctaa
DBGET
integrated database retrieval system
