Capnocytophaga haemolytica: AXF12_03420
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Entry
AXF12_03420 CDS
T04287
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chg
Capnocytophaga haemolytica
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chg03009
]
AXF12_03420
Enzymes [BR:
chg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AXF12_03420
Ribosome biogenesis [BR:
chg03009
]
Prokaryotic type
ribosomal protein modification factors
AXF12_03420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AMD84656
UniProt:
A0AAX2GY16
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Position
769198..770511
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AA seq
437 aa
AA seq
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MRTKSIKQNVINVVTLGCSKNVYDSEVLAGQLKGSGKKVVHEQQGNIVVINTCGFIGSAK
EESVNTILDYVHRKERGQVDKVFVMGCLSERYKPDLEKEIPDVDQYFGTSELPQLLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHKSTPIEDLVREAEGLA
AKGVKELILIAQDLTYYGLDLYGARRLADLLRALAKVEGIEWIRLHYAFPTGFPMDVLEV
MKTEPKICKYLDIPLQHISDKILKSMKRGTTQAKTTKLLKTFREALPEMAIRTTLIVGYP
GETGEDFEALKAFVKEMRFDRLGCFTYSHEEDTAAYVLADDVPEEVKMARANAIMELQGQ
ISWELNQQKVGKVFRCLIDRKEGNYFVGRTEYDSPDVDNEVLIDARKHYVKIGDFAHIKI
TEAADYDLYGEPVLNDE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccaaatcaattaaacagaacgttatcaatgtggtaaccttgggttgctcgaaa
aatgtatatgacagtgaggtgctggcagggcaactcaaaggcagtggcaagaaggtggtg
cacgagcagcagggtaacatcgtggtgatcaacacctgtggctttattggcagtgccaaa
gaggagagcgtgaacacgatcctcgactatgtgcatcgcaaggagcgcggtcaggtagac
aaggtgttcgtaatgggctgcctcagtgagcggtataagcctgatttagagaaggaaatt
cccgatgtagaccaatatttcggcaccagcgagctgccccaattgctcaaggtgctgggg
gcggactacaagcacgaactcattggtgagcgactgacgaccacgcccaagaattacgcc
tacttgaagatcgccgagggctgcgaccgtccgtgtagtttttgtgccattccgctgatg
cgcggcagccataagtccacccccattgaggatttggtgcgcgaggctgagggcttagca
gctaagggtgtcaaagagctgatactcatcgcgcaagaccttacctactacgggttagac
ctctatggggcacgccgcctagcggatctgctcagggcgttagcaaaggtggaaggcatt
gagtggatacgcctgcattatgccttcccgacaggcttcccgatggacgttttagaggtg
atgaaaaccgagccgaagatctgtaagtacttggatattccgctacaacacatctcggat
aagattttaaagagtatgaagcgcggtactacgcaggcaaagacgactaagctgctcaaa
accttccgcgaagcgttgcccgagatggctattcgcactacgcttatcgtgggttaccct
ggggagacgggggaggattttgaggcactgaaagcctttgtaaaggaaatgcgcttcgac
cgcctcggttgttttacgtatagccacgaggaggatacagcggcttatgtcttggcggac
gatgtgcctgaggaggtgaagatggcgcgcgccaatgccattatggagttgcaagggcag
atttcgtgggagctcaatcagcagaaagtaggtaaggttttccgctgcctgattgataga
aaagagggtaattacttcgttgggcgtactgagtacgactcgcctgatgtggataatgag
gtgctgattgatgcacgtaagcactatgtgaagataggcgattttgcccacataaagatt
accgaagctgctgattatgatctctatggagaaccggtccttaatgatgagtag
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