Capnocytophaga haemolytica: AXF12_05630
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Entry
AXF12_05630 CDS
T04287
Name
(GenBank) peptidoglycan-binding protein LysM
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
chg
Capnocytophaga haemolytica
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chg01002
]
AXF12_05630
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chg01011
]
AXF12_05630
Peptidases and inhibitors [BR:
chg01002
]
Cysteine peptidases
Family C40
AXF12_05630
Peptidoglycan biosynthesis and degradation proteins [BR:
chg01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
AXF12_05630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM1_NFP_LYK
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AMD85044
UniProt:
A0AAX2GXZ2
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Position
1286753..1288684
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AA seq
643 aa
AA seq
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MKRFITLSLMLLWGALSLHAQQTYTAKGYETVENIAKTYRLSPADIVKANSGLKDAVQKG
QTINIPVSKYKHYNTQRPESFKIHLVKGGETFFGLSQRYRINIDDIKRYNLDLYTRELQE
GERITIPVFNKDTEVVQKVNPGQKRYVVKPLETLWKIAKNHNVSVEELERINKGEKGFDA
NNLRGGQEIWVPASAVDTSDTATPNIPAGKNLVLYNVEKGEGFYSLERKFGLSEADLIKL
NPDLKSGLKSDSQIWIPKENFNRYSNAAATTTSDYNFKNANTSLRSASSPSKVKEISYIL
PFKVSDVGGGNKMELRTRLKSNKLTPIATDFYSGALMALDSLQKMGYKFKVNTYDSEADD
MQKIVSTPAVKNSQIVIGPFTTKRFNDLASAITSPNTALLAPLANKNITLNPNVFQTLPS
DEAQQARMIDYVAKHYSDANIMILADSKNGAIREKLERAFPNAKVITEMSAAGFNNALSP
TKENFVLLQSNDVGYVSLVVRILHNALKVGKGATAPKITLATLDKGNVFDSNSISNSQLS
DLHFTYPTVNKYSNGSDAFSQRYLKTYGVLPNKYAIRGFDITMDAVLRLGVSGNFTGSSS
QVGETSYLENKFAYQKNAYRGGGYENQGVYIVQYDDMEVKELQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttataacacttagtttaatgctactatggggcgcactgagcctgcacgca
cagcagacctatacggcaaaaggctatgaaaccgttgagaatattgcaaaaacctaccgc
ctctcacctgcggatattgttaaagcgaattctggcttgaaggatgctgttcagaaaggg
cagacgatcaatatccctgtgagtaagtacaagcattacaatacccagcgccctgagagc
tttaagatacacttggtgaagggcggtgagactttcttcgggctgtcgcagcgatatcgc
attaatattgacgatattaagcgctacaacttagatctgtacacacgcgagctacaagaa
ggggagcgcattactatcccagtattcaataaagatacagaggtagtgcagaaggttaat
cctgggcaaaagcgctatgtagtaaaaccactcgaaacactttggaagattgctaagaac
cataatgtgagtgttgaagagttggagcgtatcaacaaaggagaaaaaggctttgatgcc
aataacctcagaggagggcaagagatatgggtgccagcctcagcagttgatacttccgat
acagcaacccctaacatcccagcagggaagaatttagtgctttacaacgtagaaaaaggg
gaaggcttttacagcttagaacgcaaatttgggctctcagaagccgatttaatcaagctc
aatcccgacttgaagtcaggcttaaagagcgactcacagatatggattcctaaggagaat
tttaaccgttatagcaatgcggcagctactaccaccagcgattacaactttaagaatgcc
aatacatctctgcgctcggcttcttctccctctaaagtgaaggaaatctcgtatattcta
ccttttaaggtctccgatgtaggtggaggcaacaagatggagctgcgcacgcgccttaag
agtaataagctcactcccatcgctaccgacttctattcaggggctttgatggcactggac
tctttgcagaagatgggttataagttcaaggtcaatacctatgatagtgaggcagatgat
atgcagaagattgtcagcacccctgcggtgaagaactcacaaatagtgataggtcccttt
actactaagcggttcaacgacttagcttcggcaattacgagtcctaataccgccctcttg
gcgcctttggcaaataagaatatcacgctcaacccgaatgtattccagacactgcctagc
gatgaggcacagcaagcccgtatgattgattatgtggctaagcactattccgatgcgaat
attatgatattggcagatagtaaaaatggggctatacgtgagaagttagagcgtgctttt
ccgaatgccaaggtgataacagagatgtcagcagcaggctttaacaatgcgctgagccct
accaaggagaactttgtgctattgcagtccaacgatgtaggctatgtgtcgctggtagtg
cgcatattgcacaacgccctgaaagtaggtaagggagctacagcgccaaagattacgctg
gctaccttggacaaaggcaatgtgttcgactctaacagtatctccaatagccaactatcg
gacttgcactttacctacccgacagtcaataagtactctaacggcagtgatgccttctca
caacgctacctaaagacttatggtgttctgcccaacaaatacgctattcgcggtttcgac
atcacgatggatgcagtactcagattgggtgtatcaggcaactttacaggtagcagtagc
caagtaggtgaaacctcctatttagagaataagtttgcctaccagaagaatgcttatcgt
ggaggaggctatgaaaaccaaggagtatatatcgtgcaatacgacgatatggaagtaaaa
gaattacagtag
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