Capnocytophaga haemolytica: AXF12_06585
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Entry
AXF12_06585 CDS
T04287
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chg
Capnocytophaga haemolytica
Pathway
chg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF12_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chg03019
]
AXF12_06585
03016 Transfer RNA biogenesis [BR:
chg03016
]
AXF12_06585
Enzymes [BR:
chg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXF12_06585
Messenger RNA biogenesis [BR:
chg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF12_06585
Transfer RNA biogenesis [BR:
chg03016
]
Prokaryotic type
tRNA degradation factors
AXF12_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AMD85204
UniProt:
A0AAX2GV38
LinkDB
All DBs
Position
complement(1466154..1468379)
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AA seq
741 aa
AA seq
DB search
MIPEPKREIIELGDGRTISIETGKLAKQADGSVVVRMGNAMLLATVVSAREINPETDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDQEILTMRLVDRVLRPLFPKDYHAETQVMIQLI
SHDENVMPDALAGLAASAAIAVSDIPFAGPISEVRVGRVGGQFVVNPSKAQLEESDIDIM
VGASRDFVAMVEGEMDEVSEKDMAEAIKFAHEAIKSHIDAQLRLAEKVGVPTEKRAYEPE
VENEEVKAKVYPYAYDKCYAIAKEGTTKQERGEKFAAVLDECLAFYTEEEQEELAPLVKK
YFGDAEKEAVRRLILDEGIRLDGRNTTQIRPIWCEIDYLPSAHGSSIFTRGETQSLTTVT
LGTSREANVIDLPTEQGEERFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKRMV
PEDCPYTVRVVSEILESNGSSSMATVCAGTLALMDAGVQMIKPVSGIAMGLITDGDKYAV
LSDILGDEDHLGDMDFKVTGTKDGITACQMDIKIKGLTYEILEKALEQAREGRMHILGKI
TDTIDAPKPTVKPHAPKIVKMEMPKEYIGAFIGTGGKNIQDLQARTETTIVVEEVGEFGI
VEILGTNEAGIQEAIEAVKAVSFEPVEGETYTVTVTRLLEFGAVVEFMPGKDTLLHISEV
AWERTDKIEDVLKEGDVLEVKYLGIDPKTKKSRVSRKALLPRPPREDRPERSDRPREDRP
RGGHNGKPRSGNNDRRHDNKR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgattccagaaccaaaaagagaaatcatcgaattgggagatgggcgtaccatctctatt
gaaacaggcaagttggctaagcaagccgatgggtcggttgttgtgcgtatgggcaatgca
atgctgctggcaacagtagtctctgctcgtgaaattaatcccgagacggactttctgccg
ctcactgtggattatcgtgagaagtttgctgcggcagggcgtttccctgggggcttcttc
aaacgtgaggcgcgccccagcgatcaggaaatcctgacaatgcgcttggtagaccgcgta
ttgcgcccgctattccctaaagattaccacgccgaaacgcaggtgatgatacagctcatc
tctcacgatgagaatgtaatgcccgatgcgctggcaggtttggcagcctctgctgcgata
gccgtatcagatattccgtttgcagggcctatctccgaggtacgtgtagggcgcgtaggg
ggtcagtttgtggtaaaccccagcaaggcacagttagaagagtcggatatcgacattatg
gtgggtgcttcgcgcgactttgtggcaatggtggaaggcgaaatggatgaagtatccgaa
aaggatatggctgaggcgattaagtttgcccacgaagctatcaagtcgcacatcgatgca
cagttgcgtttagctgagaaggtaggcgtacctactgaaaaacgcgcttatgagcctgag
gtagaaaacgaagaggtgaaagccaaagtatatccttatgcttacgataagtgctatgcg
attgctaaggaaggaactactaagcaagagcgcggtgagaagtttgctgccgtattagac
gagtgcttggcgttctacacagaggaagagcaggaagagttggcaccgctggtaaagaaa
tacttcggtgatgctgagaaagaggcagtgcgccgcttgatattagacgaaggtatccgc
ctcgatggacgtaataccacgcaaatacgccctatctggtgcgaaatcgactacttgcca
tcggcacacgggtcgtctatctttacgcgtggggagacgcaatcgctcactaccgtaaca
cttggtacttcgcgtgaggcaaacgtcatcgacctgcctactgagcaaggtgaagaacgc
ttctacttacactataacttcccgccattctccacaggcgaggcacgcccattgcgtggt
acttcgcgccgtgagatcggtcacgggaacttagcacagcgcgccttaaagcgtatggtg
cctgaggattgcccatacaccgtgcgtgtggtatcggagatattagaatctaacggctcc
tcatcaatggcgactgtttgtgcgggtacgctcgcgcttatggatgctggggtgcagatg
attaagcctgtatcagggattgcaatggggctcatcaccgatggcgataagtatgcggta
ctttctgacatcttgggcgatgaagaccatctcggcgatatggacttcaaggtaacaggt
actaaggacggtatcaccgcttgccagatggacatcaagattaagggcttgacgtatgaa
atccttgaaaaggcgttggagcaagcgcgtgaagggcgtatgcacatcttgggtaagatt
accgatactatcgatgcgcctaagccaactgtgaagccacacgcgcctaagattgtgaag
atggagatgcctaaggaatacatcggtgcctttatcggtacgggtggtaagaatatccaa
gacctacaagcgcgcactgagactactatcgtagtggaagaagtgggtgaatttggtatt
gtggaaatcttaggcacgaacgaggcaggcattcaggaagctattgaggcagtgaaagcg
gtgtcgtttgagcctgtagaaggggaaacctacaccgtaacagtaacccgcttgctcgag
tttggtgcggtagtagagtttatgcccggtaaggatacgctcttgcacatctcggaagta
gcgtgggagcgcacggataagattgaggacgtactcaaagaaggtgatgtgcttgaggtg
aaatacttgggtatcgaccctaagacaaagaagagccgtgtatcgcgcaaggcactcttg
ccacgcccgccacgtgaagaccgccccgagcgttctgaccgtccgcgtgaagaccgccca
agaggaggccacaacgggaagccacgtagtggtaacaacgatcgcagacacgataacaag
agatag
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