Capnocytophaga haemolytica: AXF12_08100
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Entry
AXF12_08100 CDS
T04287
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
chg
Capnocytophaga haemolytica
Pathway
chg00260
Glycine, serine and threonine metabolism
chg00460
Cyanoamino acid metabolism
chg00630
Glyoxylate and dicarboxylate metabolism
chg00670
One carbon pool by folate
chg00680
Methane metabolism
chg01100
Metabolic pathways
chg01110
Biosynthesis of secondary metabolites
chg01120
Microbial metabolism in diverse environments
chg01200
Carbon metabolism
chg01230
Biosynthesis of amino acids
chg01240
Biosynthesis of cofactors
chg04981
Folate transport and metabolism
Module
chg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AXF12_08100 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AXF12_08100 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AXF12_08100 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AXF12_08100 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AXF12_08100 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AXF12_08100 (glyA)
Enzymes [BR:
chg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AXF12_08100 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMD85476
UniProt:
A0AAX2GU44
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All DBs
Position
1790616..1791893
Genome browser
AA seq
425 aa
AA seq
DB search
MQRDIDIFELIEDERERQERGIELIASENFVSKQVMEAAGSVLTNKYAEGYPSHRYYGGC
EVIDEIEQIAINRARALFGAEYANVQPHSGSQANAAVYAACLKTGDKILGFDLSHGGHLT
HGSPVNFSGRLYQPVFYGVDKESGRLDYNRILEVALKEQPKMIVAGASAYSRDIDFKAFR
DIANKVGALLFADISHPAGLIAKGLLNDPMPYCHIVTTTTHKTLRGPRGGLILLGKDFEN
PFGIKTPKGDARMMSSLLDSAVFPGNQGGPLEHIIAAKAVAFGEALSDDFLHYAIEVQKN
AHKLAVLLVGKGYDIISKGTDNHLMLIDLRNKNISGKEAEQALGKADITVNKNMVPFDTR
SPFITSGIRVGVAAITTRGLKEADMQQIADFIDDAIQHASNDDYLEGIASEVNKFMEGRP
LFAQE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagatattgacatcttcgaacttattgaagacgaaagagaaagacaagagaga
ggtattgaactgattgcttctgagaactttgtaagtaaacaagtgatggaagcggctggc
tctgtacttactaataaatatgccgaaggctacccttcgcataggtattatgggggttgt
gaggtaatcgatgagatagagcaaatcgctattaatcgcgctcgtgcactttttggggct
gagtatgcgaatgtgcagcctcacagtggttcgcaagccaacgcggctgtatatgctgct
tgcttaaagactggggataagatattgggctttgatctttcgcacggtgggcacttaacg
cacggctcgcctgtgaatttttctgggaggctctaccaacctgtgttctatggcgtagat
aaggaaagtggcaggcttgactataacaggatacttgaagtcgctctaaaagaacagcct
aagatgatcgtagcaggagcttcggcttattctcgcgatattgactttaaggcgtttaga
gatattgccaacaaagtaggtgcgctgctttttgcggatatatcgcatcctgcgggattg
atcgccaaggggttgttaaacgaccctatgccatattgccacatcgttacgaccactact
cacaagacgcttcgaggaccacgtggcggtctgatattgctgggcaaggactttgagaat
ccttttggaattaagactcctaagggggatgcgcgtatgatgtcgtccttattagatagt
gcggtattccctggcaatcaaggaggtccgttggagcatattattgctgcaaaagctgtt
gcctttggtgaggcactctctgatgattttcttcattatgctattgaggtgcaaaagaat
gcgcataaattagctgtcctcttggtagggaaaggttatgatatcatctcaaagggtact
gacaaccacttaatgctcattgatttacgaaataagaacatcagtggtaaagaggcagaa
caggctctgggtaaagctgatatcacggtgaataagaatatggtgccttttgatacgcgc
tcgcctttcatcaccagtggtatccgtgtaggggtggctgctatcaccaccagaggtctt
aaagaagctgatatgcaacagattgctgattttatagatgatgccatacagcacgccagc
aatgatgattatctcgaaggtattgcttcagaagtcaataagtttatggaaggcagacct
ttatttgctcaagaataa
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