Capnocytophaga haemolytica: AXF12_08860
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Entry
AXF12_08860 CDS
T04287
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chg
Capnocytophaga haemolytica
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chg03016
]
AXF12_08860
Enzymes [BR:
chg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXF12_08860
Transfer RNA biogenesis [BR:
chg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXF12_08860
Prokaryotic type
AXF12_08860
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMD85612
UniProt:
A0AAX2H3P1
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All DBs
Position
complement(1969626..1970324)
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AA seq
232 aa
AA seq
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MITAEEFAEGRILLIDKPLGWSSFQAVNKIKWAILRHYKQKKIKIGHAGTLDPLASGLLV
VCTGKFTKKITEIQDAVKTYTGTITVGATTPSYDMETEVEVHYPTEHITPEKIEIVRQQF
VGEIEQVPPVFSAIKRAGKRLYEFAREGEAIEVPTRKVQVHRFELDTTEFPLLHFEVECS
KGTYVRSLANDMGKVLGSGAYLSALRRTKIGDYDVAEALSPDEFIIKHIPRL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagcagaagagtttgccgaaggacgcatattgctgattgataagccgctgggc
tggtcgtcatttcaagcagtcaacaagattaaatgggcgatcctcaggcactacaagcag
aagaaaataaagataggacacgcaggcacgcttgatcctttggcatcggggctattagtg
gtttgcacgggtaagtttactaagaaaataacagagatacaagacgctgtaaagacctat
acaggtacgatcactgtgggggcaaccaccccttcgtatgatatggagactgaggtggaa
gttcattaccccaccgagcatattacccctgagaagatagagattgtacggcagcagttt
gtaggtgaaatagagcaagtaccacctgtgttctcagcaattaagcgtgcaggtaaaagg
ctgtatgagtttgctcgcgagggagaagccatcgaagtgcccacacgcaaagtgcaggta
caccgatttgaacttgataccactgagtttccgcttttgcattttgaagtggaatgcagc
aaaggtacttacgtgcgttccttggcaaatgatatgggtaaggtgcttggttcaggggca
tacctatcagcgctcagacgtactaagataggggattacgatgtggcagaagccctctca
cctgatgaattcataataaaacatataccacgactatga
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