Capnocytophaga haemolytica: AXF12_09105
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Entry
AXF12_09105 CDS
T04287
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
chg
Capnocytophaga haemolytica
Pathway
chg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXF12_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chg03400
]
AXF12_09105
DNA repair and recombination proteins [BR:
chg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXF12_09105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXF12_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_15
nSTAND1
BCA_ABC_TP_C
MeaB
Viral_helicase1
cobW
PRK
Motif
Other DBs
NCBI-ProteinID:
AMD86257
LinkDB
All DBs
Position
complement(2030230..2033064)
Genome browser
AA seq
944 aa
AA seq
DB search
MQPSKPLLTDVEYIEVQGARVHNLKNIDVNIPREQLVVFTGLSGSGKSSLAFDTIYAEGQ
RRYIETFSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTVTEIYDFLRL
LFARASDAFSYVTGEKMVSYSDAQIQTLITEQYAGKRINVLAPVVQSRKGHYRELFEQIA
KQGFVKVRTDGVIQDIERGMKLDRYKTHDIEIVVDRLQVGTTEEDQKRLQETIQIAMNYG
NEVLMVLAEGETKPQYFSRTLMCPTSGISYPMPEPNTFSFNSPKGMCPHCNGLGEIQEVN
LSKIIPDDSLSIKNGGILPIGEQKNTWIFKQLETIVQKFGCKLSDPIKKLPKEAIDIILY
GGKDKYAVKSEVLGVTRNFEIDFEGIISFIESQYEQSDSTSVKRWATDFMDTIPCPECKG
TRLRKEALYFKIADKNIAELSAFDIAELLVWFKALPEQLSPKQWQIAEEVVKEITTRLQF
LVDVGLTYLALGRGSKTLSGGEAQRIRLATQIGSQLTGVLYILDEPSIGLHQRDNKRLIN
SLKSLRDIGNSVIVVEHDEEMITEADYVIDIGPKAGVSGGEIIFEGTPAELLQADTTTAD
YISKRKAIAPGERRKGNGKSIVLKGCTGNNLKNVTVEFPLGVMIGVTGVSGSGKSTLINE
TLYPILNAHFFNAVKKPMPYKSIEGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFSEIRS
LFTQTPEAMIRGYKPGRFSFNVKGGRCETCEGSGLKLIEMNFLPDVYVPCETCKGKRFNR
ETLEVRYKGKSIADVLDMTISEAVQFFEHIPKIYRKLKTIEEVGLGYITLGQQSTTLSGG
EAQRVKLATELSKIDTGNTFYILDEPTTGLHFEDVKVLLDVLDRLVDKGNTVLVIEHNLD
VIRKVDYIIDIGYEGGKGGGKVVATGTPEEVAKNKKSYTAEFLR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atacaaccttctaaaccactccttaccgatgtagaatacatcgaagtacagggcgcacgg
gtacataatcttaaaaatatagacgtcaatatcccgcgtgagcagctcgtggtgttcaca
gggctctcgggcagtgggaagtcctctctggcatttgataccatctatgcagaggggcaa
cgccgctatatcgagacgttctcggcgtatgcacggcagttcctcggcggattagaacgc
cccgatgtagacaagattgatgggctctcccccgtgattgccattgagcagaagaccacc
tcgaaatcgccgcgctctacggtgggcaccgtaacggagatttacgacttcttgcgcctc
ctttttgcgcgcgcctcagatgccttcagctacgttacgggcgagaagatggtcagctat
agcgatgcccaaatacagacgcttatcaccgagcagtacgcaggcaagcgcatcaatgtg
ctcgcccccgtagtgcaatcgcgcaagggacactatcgcgaactctttgagcagatcgct
aaacagggcttcgtaaaggtgcgtaccgatggggtgatacaagacattgagcgcggtatg
aaactcgaccgctacaaaacccacgacattgagattgtggtagataggctacaagtgggc
actactgaggaagaccaaaagcggctgcaagaaaccatacaaatcgctatgaactacggc
aatgaggtgctgatggtgcttgcggaaggcgagacgaaacctcagtattttagccgtacg
ctgatgtgccccacctcagggatttcctaccctatgcccgagccgaacaccttttcgttc
aactcccccaaaggaatgtgcccccattgcaacggcttgggtgagatacaggaggtaaac
ctttccaagattatcccagacgacagcctttctatcaagaatggtgggatattgcccata
ggtgaacagaagaatacctggatattcaagcaattggagactatcgtgcagaaatttggc
tgcaaactctccgatccgattaagaagttgcccaaggaggcaatagatattatcctttac
gggggtaaagacaagtacgctgtaaaatcggaagtattgggcgttacccgcaattttgag
atagatttcgagggcatcatcagctttattgagagccaatacgagcagagcgattctact
tccgtaaagcgttgggcaacagactttatggataccattccctgcccagagtgcaagggc
acgcggctgaggaaggaagccctttacttcaagattgctgataagaacatcgcagagctt
tccgctttcgatattgccgagctattggtgtggttcaaggcattgcctgagcagctgagc
cctaagcagtggcaaatcgcagaagaggtagtcaaagaaatcacaacgcgactgcaattc
ttagtagatgtagggcttacctatttggcattggggcgcggctctaagacgctttcgggc
ggtgaggcacagcgcatacggctcgctacacagataggctcacagctcacgggcgtgctc
tacatcttagacgaacccagcatcgggctacaccaaagagacaacaagcgacttattaat
tccctcaaatcactacgcgacatcggcaactccgtgatcgtagtagaacacgatgaggag
atgattaccgaggctgattatgtaattgatattggtcccaaagcaggggtaagtggcggt
gagattatcttcgaaggaacgcccgccgagctactccaagccgataccaccactgcggat
tacatcagcaaacgcaaggcgatagccccaggcgaacgccgcaaaggcaatggcaagagc
atagtgctcaaaggctgtacgggcaataacctcaagaacgttacagtagagttccctctc
ggggtgatgataggcgtaacaggtgtatcgggcagcggtaaatccacccttatcaacgag
accctttaccccatactcaatgcccatttcttcaacgccgtaaagaagccgatgccctac
aagagcatcgaaggcttagagcatatcgataaggttatcgatatcgaccaatcgcccatt
ggtcgcacgccgcgctccaacccagcgacttacacaggggtatttagcgagatacgctcc
cttttcacccaaacccccgaggcgatgatacggggctataaaccagggcgattcagcttt
aatgtaaagggcggccgttgcgagacctgcgaaggctcaggcctgaaactcatcgagatg
aactttctccccgatgtgtacgtcccttgtgagacctgcaaaggcaaacgcttcaaccgt
gagactttagaggtgcgctacaaaggcaagtccatagccgatgtgctggatatgaccatc
agcgaggccgtgcagttctttgagcatatccccaagatatatcgcaaactcaagactatt
gaggaggtcggattggggtatatcacactcgggcaacagtccaccacgctatcaggcgga
gaggcacagcgcgtaaagctcgctaccgaactctccaagatagatacgggcaacacgttt
tacatcttagacgagcccaccacagggctacactttgaagacgtaaaagtgctcttagac
gtcctcgaccgccttgtggacaaaggcaacaccgtgctggtgatagagcacaacttagat
gtgataaggaaagtagactacatcattgatataggctatgaaggaggcaaaggcggcggc
aaggtagtagccacaggcacccctgaggaagtcgccaagaataaaaagagttacaccgct
gaatttttgagatga
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