KEGG   Capnocytophaga haemolytica: AXF12_10335
Entry
AXF12_10335       CDS       T04287                                 
Name
(GenBank) ABC-ATPase UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
chg  Capnocytophaga haemolytica
Pathway
chg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AXF12_10335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chg03400]
    AXF12_10335
DNA repair and recombination proteins [BR:chg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AXF12_10335
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AXF12_10335
SSDB
Motif
Pfam: ABC_tran UvrA_inter SMC_N AAA_21 UvrA_DNA-bind AAA_16 AAA_29 nSTAND1 AAA_15 nSTAND3 DnaJ_CXXCXGXG AAA_22 RsgA_GTPase ATPase AAA_33 AAA_18 NACHT Viral_helicase1 AAA_23 BCA_ABC_TP_C NTPase_1 cobW nSTAND_NTPase5
Other DBs
NCBI-ProteinID: AMD86273
UniProt: A0ABN4KI48
LinkDB
Position
complement(2328470..2331226)
AA seq 918 aa
MKTKEILIKGAKLHNLKDITVGIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGRLDKPKVDNIVGIAPAIAIEQKVNTSNPRSTVGTSTEVYDYLKLLFARIGKT
YSPVSGQEVKRHSVSDVVDVVLAYPEREKLLLLAPIHLPDGRTPQQALQLLLQQGYVRIL
YRGEVLRIDEELPEVEGDFALVVDRVVVSHTEDFAHRLADAVDTAFFEGKGECALQEVGT
GKVLHFSNKFEADGITFLEPNVHLFSFNNPYGACPKCEGYGDTIGLDEELIVPNTGLSVY
EGCIYPWRGETMGWFKDQLVNNAYKFDFPIHKPWYELTAAQKRLVWKGNEYFTGLTDFFK
ELEEKSYKIQNRVLLARYRGKTRCDACHGRRLRPEADYVKINGKSISDLVEISIEELQQF
FKTIALTDYEREVAKRLLVEINNRIQFLLDVGLGYLTLNRKSNSLSGGESQRINLATSLG
SSLVGSMYILDEPSIGLHPKDTEKLIGVLQSLRDLGNTVVVVEHDADIMKAADYIIDIGP
EAGVHGGEVVAEGTYDTLLKADSLTGQYLSGRMKIEVPTERRNSPHYITLVGCRENNLKN
IDVTFPLDMLTVVTGVSGSGKSTLVKKILYPALQKELDLGGEKIGQFTRIEGKYKQLQSV
EFVDQNPIGKSTRSNPITYIKAYDDIRALYASQKLSKLRGFQAKHFSFNIDGGRCEVCKG
EGEITVEMQFMADVHLTCEACGGKRFKKEVLEVTFGGKNIDELLNTTIDEAVAFFATNAQ
PKIAAKLKPLQDVGLGYVTLGQSSSTLSGGEAQRIKLASFLSKSDSKEKVLFIFDEPTTG
LHFHDIRKLLQSLQALIEKGHSVVVIEHNVEMIKSADYVIDLGQDGGDRGGEVIAQGTPE
EIAKNKKSYTGKYLDFGK
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaagacaaaagagatactgataaagggtgctaagttgcacaatttgaaagatataacc
gtgggtattccgcgtaataaactcgtggtaatcacgggcttgtcgggtagtgggaagtcg
tctttggcgtttgatacgctctatgctgaggggcaacgccgctatgtggagagcctttct
tcgtatgcacgacagttcctcgggcggctcgataagcccaaggtagacaatatcgtgggg
attgcccctgccatagccatcgagcagaaggtcaatacctcgaatccgcgctctacggtg
ggcacctccacggaggtatacgactacctcaaactgctctttgcgcgcattggcaagacc
tactcgcccgtctcgggacaggaggtgaagcggcacagcgtgagcgatgtggtagatgtg
gtactcgcttacccagagcgggaaaagctgctgctgctcgcccctatacatttgcccgat
gggcgtacgccccagcaggcactgcaattgcttttgcagcagggctatgtgcgcatcttg
taccgcggtgaggtgctgcgcatcgatgaggagctgcccgaagtggaaggcgactttgct
ttagtggtagaccgcgtggtagtgtcgcacactgaggactttgcgcatcgcttggcagac
gcggtggatacggctttctttgagggcaaaggcgagtgcgccctacaggaggtcggtacg
gggaaggtgctgcattttagcaataagtttgaggcagacggcatcacctttttagagcct
aatgtgcatctgtttagctttaacaatccttatggggcttgccccaagtgcgagggctat
ggcgatacgataggcttagacgaggaactgattgtccctaacacggggctatcggtatat
gagggctgtatctacccttggcgcggcgagactatgggttggtttaaagaccaattggtg
aataatgcctataaattcgattttccgatacacaagccttggtatgagctcaccgctgcc
caaaagcgactcgtatggaagggtaatgagtattttacggggcttacggacttcttcaag
gaactcgaagagaagagctataagatacagaaccgcgtgctcttggcgcgctatcgcggt
aagacgcgttgcgatgcctgccacggacgccgcttgcgccccgaagcagactatgtgaaa
atcaacgggaagagcatttccgacttggtggaaatctccattgaggagctgcaacagttc
tttaagaccatagcactcaccgattacgaacgggaagtggccaagcggctattggtggaa
atcaataaccgcatacagttcctgctcgatgtggggctgggttacctcacgctcaaccgc
aagtcgaatagcctatcaggaggcgagagccagcgtattaacttggctacatcgctgggt
agtagcctcgtaggctcgatgtatatcttagacgagcccagcattggactgcaccctaag
gacaccgagaagctcatcggggtgctccaatccctgcgcgacttgggcaatacggtggtg
gtagtggagcacgatgccgacataatgaaggctgcggattacatcatcgatattggtcct
gaggcaggtgtgcacggtggtgaggtagtggcagaaggcacgtacgatacgctcctgaaa
gccgatagcctcacagggcagtatctcagcggtcggatgaagatagaagtacccaccgag
cggcgcaactcgccccattacatcacgttggtaggctgccgtgagaataacttaaagaat
atagacgttactttcccgctggatatgctcactgtggttacgggcgtctcgggcagtggt
aaatcgaccttggtgaagaaaatactctacccagccctgcaaaaggagctggacttgggc
ggggagaagatagggcagtttacgcgtatagaaggcaaatataagcaattgcaatcggtg
gagtttgtagaccagaaccccattggcaaatcgacccgttcgaaccctatcacctacatc
aaggcgtatgacgatatacgggcactctacgccagccaaaagctctcgaaactcaggggc
tttcaggcaaagcacttctcgttcaacatcgatggagggcgttgtgaggtgtgcaaaggc
gagggggagatcaccgttgagatgcaatttatggcagatgtgcacctcacctgcgaggcg
tgcggcggcaagcgttttaagaaggaagtactggaagtaacctttggcggaaagaacatc
gatgagctgctgaatactaccattgacgaggcggtagcgttttttgcgacaaatgctcag
cctaagatagccgctaagctcaaacctctgcaagatgtagggttggggtacgtaacactc
gggcaatcctcctcaacactctcaggaggtgaggcacagcgcattaagctggcgtccttt
ctctcgaaatcggatagcaaggagaaagtgctctttatctttgacgagcctaccacaggg
ctgcacttccacgacatacgcaagctgctgcaatcgctgcaagccctgattgagaaaggg
cattcggtggtggttatcgagcacaatgtagagatgataaagagtgccgactacgtcatc
gacttagggcaagacggcggcgacaggggcggtgaagtcattgctcagggtacgcctgag
gagatagcaaagaataagaagagttatacggggaaatatttagattttgggaagtag

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