Capnocytophaga haemolytica: AXF12_11410
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Entry
AXF12_11410 CDS
T04287
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chg
Capnocytophaga haemolytica
Pathway
chg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXF12_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chg03021
]
AXF12_11410
03400 DNA repair and recombination proteins [BR:
chg03400
]
AXF12_11410
Enzymes [BR:
chg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXF12_11410
Transcription machinery [BR:
chg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXF12_11410
DNA repair and recombination proteins [BR:
chg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXF12_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Zona_CL1
Motif
Other DBs
NCBI-ProteinID:
AMD86060
UniProt:
A0AAX2H1N8
LinkDB
All DBs
Position
complement(2602862..2603854)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIESSDFEGRFEFRPLEPGYGLTIGNALRRVLLSSLEGFAITSVKFD
KVGHEFSTIPGVKEDVTEIILNLKQVRFKRQVDDVEEEAATINVSGKKQLTAGDFQKYIS
SFQILNPELVICNLESTVSFTMEITIEKGRGYVPAEENAKPNAAIGVIATDAIFTPIKNV
KYAIENYRVEQKTDYEKLVFDIKTDGSIHPKQALTEAAKTLIHHFMLFSDERITLESDEI
TQSDIYDEESLHMRQLLKTKLVDLDLSVRALNCLKAAEVETLGDLVSFNKPDLMKFRNFG
KKSLIELDELVAEKGLFFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaactttcaaaaacccgataaagttataatgattgaatcatctgatttc
gaggggcgatttgaattccgccccttggaaccaggctatggtttaacaataggtaacgca
ttacggagggtgttgctctcttctttggaaggcttcgccattacatccgtaaaatttgat
aaagtagggcacgagttttctacaataccaggtgtgaaggaagatgttactgaaataatc
ctcaacttaaagcaagtgcgtttcaaacgccaagtcgatgacgttgaagaagaagcagca
accatcaacgtctctggtaaaaaacaattgactgccggtgattttcagaaatatatctct
tctttccaaatcctcaaccccgagttggtgatttgcaatctggaatcgaccgtatctttc
actatggaaattaccatcgagaaaggtcgtggttacgtacccgcggaagagaatgcaaaa
ccaaatgcagccataggcgtgattgctaccgacgcaatctttacaccgattaagaatgta
aagtacgcaattgagaattatcgcgttgagcaaaagaccgactacgaaaagttagtcttt
gatataaaaaccgatggttccattcaccctaagcaagcccttactgaggccgctaagacg
ctcattcatcactttatgctcttctccgacgagagaattaccttagagtccgatgaaatc
actcaatcggatatctacgacgaagaatcgctgcatatgcgccaattgctgaaaaccaaa
ctcgttgacctcgacctctcagtgcgcgccctcaactgtttgaaggctgccgaagtcgaa
accctcggcgacttggtttctttcaacaagcccgaccttatgaagttcagaaacttcggt
aagaaatcgctgattgagctcgacgaattagtagccgaaaaaggcttattcttcggtatg
gatttatcaaagtataaattagataaggattaa
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