Chryseobacterium glaciei: A0O34_03270
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Entry
A0O34_03270 CDS
T04575
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chh
Chryseobacterium glaciei
Pathway
chh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0O34_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chh03019
]
A0O34_03270
03009 Ribosome biogenesis [BR:
chh03009
]
A0O34_03270
Enzymes [BR:
chh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0O34_03270
Messenger RNA biogenesis [BR:
chh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0O34_03270
Ribosome biogenesis [BR:
chh03009
]
Prokaryotic type
rRNA helicases
A0O34_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANF49626
UniProt:
A0A172XRS1
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All DBs
Position
complement(737289..739013)
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AA seq
574 aa
AA seq
DB search
MNLFTESNLSPDILKAVGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQFLVLCPTRELCLQISKDIKNYSKYMKDIKTTAVYGGSSIMDQIRSLK
DKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILRETPETKQT
FLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNIKHEYYVVGYRNKKEALKRLIDAN
PNQYSILFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISISLIKPEESRKLKQIKST
TKIDIVEKFIPTGAEVIKAQVGGVFEKLLTVHEDIFEFDDSLIPDLSAFTKEELVHKLLQ
FQLKDLALYYKDKHDLVDQKFSNRDDDYPRRDRDRGRDRDRDRGGRDRDTRSSGDRDRGG
RERSGKPRRKNEDMVRFFFNLGKKDQLKKLDVLDIINKATTPAEGSKKRAEIGDIEILEK
FSFFEIEKSFKGELLNNIASMKFKGKDMRAEEAN
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagtccaatttaagtcctgacattcttaaggcagttggcgaactg
ggttatgaaagcccaacagaaatccaaaaacagactatcccttttattctttcagatatt
cgcgacttgatcgcacttgcgcaaacagggacaggcaaaacagcagcgttttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaatttttggtgctttgtccgaca
cgagaactatgtcttcagatttctaaagacataaaaaattactccaaatacatgaaagac
atcaaaactacagcagtttacggtggaagcagtattatggaccaaattagatctctaaag
gataagccacagattattgtaggtactccaggaagagttatcgaccttatcaacagaaaa
gcactagacttttctgctattcattggttagttttagacgaagctgatgaaatgctttca
atgggtttcaaagacgaattggaaacaattttgagagaaactcctgaaacaaaacaaact
ttcttattctctgcaacgatgaataaagaagtggaaagaatttctaaaaattatcttaca
aaaccacaccgtatttctgtgggttctattaacgaggttaagaagaacatcaaacatgaa
tattacgttgttgggtaccgtaacaaaaaagaagctcttaagagattaattgatgcaaac
cctaaccagtattcaattttgttctgtagaacaagaatggagactcaggaagttgcagat
ttcttaatgcagaacggttacgcagctgatgctcttcacggagatctttctcaagcgcag
agagatactgtaatgaagaaattcagattgaaaaacatcgatattttggttgcaacagat
gttgcggcgagaggattggatgtggattcactaactcacgttatccattattctttacct
gatgatcctgaagtattcgttcacagaagtggaagaacaggtagagcaggaaaagacggg
atttcaatctctttaatcaagcctgaagaaagcagaaaattaaagcagataaaatctaca
acgaaaattgatatcgttgaaaaatttataccaacaggagcagaggttatcaaagctcag
gttggaggagttttcgaaaagttattgacagtgcatgaagatatatttgaatttgatgat
agcttgatcccggatctaagcgcgttcacaaaggaagaattggtacacaaattattgcag
ttccaattgaaagatcttgcattgtactacaaagataaacatgatcttgttgaccagaaa
ttcagcaacagagatgatgactatcctagaagagacagagatagaggtcgtgatagagac
agagatagaggaggaagagatcgcgatactagaagcagcggagatagagacagaggagga
agagaacgcagtggaaaacctaggagaaagaatgaagatatggtaagattcttcttcaac
ttgggcaagaaagatcaattgaaaaaattagatgttttagatattatcaacaaagcgact
actcctgcagaaggtagtaagaaaagagccgaaattggtgacattgaaattttagagaaa
ttctctttctttgaaatagaaaaatcatttaaaggagagcttttgaataatattgcatca
atgaaattcaaaggaaaagatatgagagctgaagaggcgaattaa
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