Chryseobacterium glaciei: A0O34_03880
Help
Entry
A0O34_03880 CDS
T04575
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chh
Chryseobacterium glaciei
Pathway
chh03420
Nucleotide excision repair
chh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0O34_03880
03430 Mismatch repair
A0O34_03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chh03400
]
A0O34_03880
Enzymes [BR:
chh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0O34_03880
DNA repair and recombination proteins [BR:
chh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0O34_03880
MMR (mismatch excision repair)
Other MMR factors
A0O34_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANF49731
UniProt:
A0A172XRZ9
LinkDB
All DBs
Position
complement(882135..884465)
Genome browser
AA seq
776 aa
AA seq
DB search
MDYLKGLNESQYEAVTTLQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFTN
KAAKEMKERIAKVVGQSNARSLWMGTFHSVFARILRIEGHYLGYPSNFTIYDQQDALNVI
RKVIKDMNVDADLYKPKKVQSRISTYKNNLITVKAYFNNPELVEADEKANMKFIGQIYQK
YVEQCFKNGAMDFDDLLLKTNELLTRFPEALAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYTDAVTVSLEQNYRSTQTIVNAANVV
IAKNLQQFKKNVFSENELGDKIKVYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLVNENDSEALMRIINYPT
RGIGETTQNKLIVFADSQNIPVSNVLDNLPIYAPQLGFNNGVLTKLSDFWSMIKAFQVLL
KTETAYNVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LPNFLENIALSADTQNKDNEDEMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQVFFSYAVSRFQWGKITDAEPSRFLSEIDEEFIEFVNPAIEK
RFINNTGVKSNIFDEHPSEMKSFKRVEKKSIEKAEGSKPIAEPRKLKPVSTAKIINPSGA
SSQDIVVGDSVRHDRFGIGQVTFLDGTDPQNIKAKVIFMHEGEKNLILKYAKLTKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaatgaatcacaatatgaagccgttaccacgttacaagga
cctctgatggtgcttgcgggagcgggttccggaaaaacgcgtgtactgacgatgcgtatc
gctcatttgattacgaatggagtagaccctttcaatattctggcgcttacctttaccaat
aaggcggcaaaagaaatgaaagaacgtattgcaaaagtggttggacaaagcaatgcaaga
agcctttggatgggaacttttcactctgtttttgcaagaattttgagaattgaaggtcat
tatttaggctatccttccaattttacgatctatgatcagcaggatgctttaaatgttatc
cgaaaagtgatcaaagacatgaatgtagatgcagatttgtataaaccgaaaaaagttcag
tcaagaatttctacttataaaaataacctgatcacggtaaaggcctatttcaacaatcct
gaattggtcgaagctgatgaaaaagccaacatgaaattcatcggacagatctatcagaaa
tatgttgaacaatgtttcaaaaatggagcaatggattttgatgatttattattgaaaacc
aatgaattattaactcgttttccggaagctttagcaaaatatcaagacagattcagatat
attttggtggatgagtaccaggatacaaaccattctcagtatcttattgttaaagcatta
gcttcaaaatttgaaaatatctgtgtggttggagatgacgctcagtctatttactctttc
cgtggcgctaatatttacaatatcttaaactttaaaaaagattatacggacgcagtaact
gtttctttggaacaaaattaccgttcaacacaaacgatcgtaaatgcggccaatgttgtg
attgctaaaaacttacagcagtttaagaaaaacgttttcagtgaaaatgaactgggagat
aaaattaaagtctaccgttcgctttccgatgcggatgaagccaatttcgttgccggaaat
atctgggaattaagaaatagagatcaaaggaaatacagtgatttcgctattttatacaga
acaaactctcaaacacgtgcctttgaagatgcgctgagacgtaaaaatattccgtacaaa
gtgtatggaggattgtctttctaccaaagaaaagaagttaaagatttgatcggttatctt
cgattattggtgaatgaaaatgactcggaagcgttgatgagaatcattaattatccgaca
agaggaatcggagaaacgactcagaataagttgatagtatttgcagattctcaaaatatt
ccggtgtctaatgttttagataatcttccgatttatgcaccgcaattaggttttaataac
ggagtcttaacaaaattgagtgatttttggtcgatgatcaaggcatttcaagtgttgtta
aaaacggaaacagcctacaatgttgcaatggaagttgccaaacgaagcggtttgattaaa
tttttaaaagacgatcagactccggaaggaatttcccgtgtagaaaacgttcaggaatta
atgaactccatgcagggctttatcgaagaacagatgcagctggaagatggagacccaagt
ttaccgaatttccttgaaaatattgctctttcggcggatacacaaaataaagataatgag
gatgaaatggtttctttaatgaccattcacctttcaaaaggactggaatttccggttgtc
cacttggttggtttggaagaaaaccttttcccgagctttatgagttctgcaaccagagaa
gatttggaagaggaaagacgtttattttacgttgccttaacgagagctgaaaaacaagtg
tttttctcatatgcagtttcccgttttcaatggggtaaaattaccgatgcagaaccttca
agatttttaagtgaaattgatgaagagtttattgaatttgtgaatcctgcgatcgaaaaa
cgtttcattaataatacgggtgtaaaatcaaatattttcgatgaacatccttctgaaatg
aaaagtttcaaaagagttgaaaagaaaagtattgaaaaagcagaaggctcaaagccaatt
gctgaaccaagaaaattgaaacctgtaagcacggctaaaattattaatccaagcggagct
tcttctcaggatatcgtagtaggagacagtgtaagacacgaccgtttcggaatcggacag
gtaactttcttggacggtacagacccgcaaaatattaaggcaaaagttattttcatgcat
gaaggcgaaaaaaatctgatcttgaaatatgctaagttgactaagatttaa
DBGET
integrated database retrieval system
