Chitiniphilus purpureus: N8I74_00160
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Entry
N8I74_00160 CDS
T08496
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
chic
Chitiniphilus purpureus
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chic03016
]
N8I74_00160
Enzymes [BR:
chic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N8I74_00160
Transfer RNA biogenesis [BR:
chic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N8I74_00160
Prokaryotic type
tRNA splicing ligases
N8I74_00160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UXY15464
UniProt:
A0ABY6DM83
LinkDB
All DBs
Position
complement(40098..41312)
Genome browser
AA seq
404 aa
AA seq
DB search
MNKYETLAVPHGASIKMWTQGVPVEQEAREQLMNTARMPFIYKHLAVMPDVHLGKGSTIG
SVIPTVGAIIPAAVGVDIGCGMMAARTTLNAADLPDNLAGLRSAIEAAVPHGRTPGRRDK
GAWDTPPASVDAMWGELADGFKRITDKYPKLKHTNNHKHLGTLGTGNHFIEVCLDEEDRV
WFMLHSGSRGVGNAIGNLFIELAQADMRQHIADLPHRDLAYFAEGSQHFDDYVEAVGWAQ
DYARRNRAVMMQNVIAAARKVIAKPFAADVQAVNCHHNYVQKEMHFGREVLVTRKGAVSA
QKGQLGIIPGSMGAKSFIVRGLGNEEAFCSCSHGAGRSMSRNEAKRRYTVDDQIRATAGV
ECRKDSEVIDEIPMAYKDIDAVMAAQSELVEVVHTLRQVVCVKG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtacgagactctcgccgtgccccacggcgcctcgatcaagatgtggacgcaa
ggcgtgccggtggagcaggaggcgcgcgagcagctgatgaacacggccaggatgcccttc
atctacaagcacctcgcggtgatgccggatgtccacctgggcaagggctcgaccatcggc
agcgtgattcccaccgtcggcgcaatcatcccggccgcggtcggcgtggatatcggctgc
ggcatgatggccgcacgcaccacgctcaacgccgccgacctgccggacaacctggccggg
ctgcgtagcgccatcgaagcggccgtgccgcatggtcgtacccccggccgccgcgacaag
ggcgcctgggatacgccgcccgccagcgtcgatgcgatgtggggcgagctggccgatggc
ttcaagcgcatcaccgacaaataccccaagctaaagcacaccaacaaccacaagcatctg
ggcacgctgggcaccggcaaccatttcatcgaggtgtgcctcgatgaggaagaccgtgtc
tggttcatgctgcactcggggtcgcgcggcgtggggaacgccatcggcaacctgttcatc
gagctggcccaggccgatatgcgccagcacatcgccgatctgccgcaccgcgacctggcg
tacttcgccgagggcagccagcacttcgacgactatgtcgaagcggtgggctgggcgcag
gactacgcgcgccgcaaccgcgcggtgatgatgcagaacgtgatcgccgctgcccgcaag
gtgatcgccaagccgttcgccgccgatgtgcaagcggtgaactgccaccacaactacgtg
cagaaggagatgcacttcggccgcgaggtgctggtgacgcgcaagggcgcagtgtcggca
cagaagggccagttgggcatcatccccggctcgatgggcgccaagagcttcatcgtgcgc
ggccttggcaacgaggaagcgttctgttcctgcagtcacggtgccggtcgcagcatgagc
cgcaacgaagccaagcgccgctacaccgtggacgaccagattcgtgccacggccggggtg
gaatgccgcaaggacagcgaggtgatcgacgagatcccgatggcctacaaggacatcgac
gccgtgatggccgcgcagtccgagctggtcgaggtggtgcatacgctgcgccaggtggtg
tgtgtgaaggggtag
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