Chitiniphilus purpureus: N8I74_00170
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Entry
N8I74_00170 CDS
T08496
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
chic
Chitiniphilus purpureus
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chic03000
]
N8I74_00170 (rtcR)
Transcription factors [BR:
chic03000
]
Prokaryotic type
Other transcription factors
Others
N8I74_00170 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
Mg_chelatase
AAA_5
AAA_22
AAA_16
NACHT
MCM
AAA_19
AAA_33
AAA_7
AAA_30
T2SSE
bpMoxR
AAA_2
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UXY15466
LinkDB
All DBs
Position
41940..43523
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AA seq
527 aa
AA seq
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MKRTVVFGFAGTVLDYVGKGAQRWEKWRPTVALCQQPDLLIHRLYLLHDSRGRGLFERLK
RDIALVSPETEVVSAEINLRDPWDFEEVYGALLDYAHGYGFDTEAEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLVQTSPPRRHDPGNVAGSYTLIDLDLSRYDRIATRFARERDETVS
FLKSGIATRHAHFNRMVEQIERVAVRSRAPLLLCGPTGAGKSLLARRVYELKKARHQLAG
RFIEVNCATLRGDSAMSALFGHVKGAFTGAQTERAGLLRSADGGLLFLDEIGELGLDEQA
MLLKAIEEKRFFPFGGDREVASDFQLISGTVRDLRQWVAQGRFREDLYARINLWTYALPG
LADRAEDIEPNLDFELARFAREQGEQVRFNAEARRAYLAFATSAAAAWRGNFRELSASVT
RLGTLAEAGRITEACVNEEIARLRHAWGGPQTGELDTLLGEAAGQLDLFDRLQLESVLQV
CRRSATLSEAGRMLFQASRESKAKPNDADRLRKYLARFGLDWQRLRG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaccgtcgtcttcggctttgccggcaccgtgctcgactacgtgggcaagggc
gcccagcgctgggagaaatggcggcccaccgtcgcgctatgccagcagcccgatctgttg
atacaccggctatacctgctgcacgacagccgcggtcgcggtctgttcgagcgcctcaag
cgcgatatcgcgctggtctcgccggaaaccgaggtggtcagcgcggaaatcaacctgcgc
gatccgtgggatttcgaggaggtgtacggcgcgctgctggattacgcgcacgggtacggc
ttcgataccgaggccgaggactacctgatccacatcaccaccggcacgcacgtggcacag
atctgctggtttctgctggccgaggcgcgctatctgccggcgcggctggtgcaaacctcg
ccgccgcgcaggcacgacccaggcaatgtggcgggcagctacacgttgatcgacctggat
ctgtcgcgctacgaccggatcgccacgcgctttgcgcgcgaacgcgatgagaccgtgtcg
ttcctgaagtcgggcatcgccacgcgccatgcgcacttcaaccggatggtggagcagatc
gaacgcgtggcggtgcgctccagggcaccgctgctgctgtgcggcccgaccggcgcaggc
aagtcgttgctggcgcgccgggtgtacgagctgaagaaggcacgccaccagctcgccggg
cgcttcatcgaggtcaactgcgccaccctgcgtggcgacagtgcgatgtcggcgctgttc
ggccatgtgaagggggcattcaccggggcgcagaccgagcgcgccggcctgttgcgcagt
gccgacggcgggctgctgttcctcgacgagatcggtgaactggggctggacgagcaggcg
atgctgctcaaggccatcgaggaaaaacgcttcttcccgttcggcggcgaccgcgaggtg
gcaagcgacttccagttgatatccggcacggtgcgcgatctgcggcaatgggtggcgcag
gggcggttccgcgaggatctgtatgcgcggatcaatctgtggacctacgcgctgccgggg
ctggccgatcgggccgaggacatcgagcccaatctggatttcgaactggcgcgctttgcc
cgcgagcagggcgagcaggtgcgcttcaatgccgaggcgcgccgcgcctacctggcattc
gccacgtcggccgcagcggcatggcgcggcaacttccgtgaactgtcggcctcggtcacc
cggctgggcacgcttgccgaggcggggcgcatcaccgaggcctgcgtgaacgaagagatc
gcccgcttgcgccacgcctggggcgggccgcagaccggcgaattggacacgctgctgggt
gaagcggccgggcagctcgatctgttcgaccgtctgcaactggaaagcgtgctgcaggtg
tgccgccgcagcgccacactgtccgaagccgggcgcatgctgttccaggcttcgcgcgag
agcaaggccaaacccaacgatgccgatcggctgcgcaagtatctggcccgcttcggactg
gattggcagcgcctgcgcgggtaa
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