Chitiniphilus purpureus: N8I74_05510
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Entry
N8I74_05510 CDS
T08496
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chic
Chitiniphilus purpureus
Pathway
chic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I74_05510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chic03019
]
N8I74_05510
03400 DNA repair and recombination proteins [BR:
chic03400
]
N8I74_05510
Enzymes [BR:
chic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N8I74_05510
Messenger RNA biogenesis [BR:
chic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8I74_05510
DNA repair and recombination proteins [BR:
chic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N8I74_05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UXY16480
LinkDB
All DBs
Position
1260256..1262391
Genome browser
AA seq
711 aa
AA seq
DB search
MLSWLRAIARPTKARENNNVAYDPRRALELLRIGSGRADATFRDGQEDAIRHIVEGKGRL
LVVQKTGWGKSFVYFIATKLLRETGAGPALLISPLLALMRNQIAAAERMGVRAATINSDN
QDEWKAVEAKLHRNEVDILLIAPEKLGNDWFNTEVLAGIAGQISLMVIDEAHCISDWGHD
FRPHYRLLERIARTLPANLRLLATTATANNRVMEDLVAVLGPNMKVLRGDLNRDSLTLQT
MRLPSQAVRMAWIAQQLNSLPGHGIIYTLTIRDANQLADWLKAKGFAVEAYTGKTGDRRE
ELEQALQENQVKALVATTALGMGYDKPDLAFVIHFQMPGSVVAYYQQVGRAGRALRSAYG
VLLSGDEEEGITDWFIRSAFPTRQEVDDVLGALNEAPEGLSIPELMTCVNMSKGRIEKTI
TALSLESPAPIAKQNTKWQLTAAELVEGFWARADRLTKLRRAELQQMQEYVARPFGQHMG
FLINALDGDSSTVSPPSLPALSEEVDDLLIREAEEFLCRTSLPIEPRKKWPAGGMPQYGI
HTASTIPYQAQPGKALCVWGDAGWGSLVRQGKYHDGRFSDELITACVKMIAEWNPQPAPT
WVTCVPSLRHPDLVPDFAQRLAAALDLPFHMVIAKTDARPEQKTMANSTQQARNIDGSLA
LNGQPILRGPVLLIDDMVDSRWTLTVSAWLLRKNGSGAVWPMALSQTGHDE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctggctccgggctatcgctcgcccgaccaaagcaagggagaacaataacgtg
gcctacgatccaagacgcgcgctggaacttcttcgaatcggttccggacgtgcagacgca
accttccgtgatggccaagaagatgccattcgccacattgtcgaaggcaaaggccgcttg
ctggtcgtgcagaagaccggatggggcaagagctttgtctacttcatcgcgaccaaattg
ctgcgggagactggagcgggccccgcgctgctgatctcaccattgctggcgctgatgcgg
aaccagatcgctgcggccgagcgaatgggagttcgcgccgccacgatcaactcggataac
caggatgagtggaaagcggttgaagccaagctccaccggaatgaagttgacattctgttg
atagcgccagagaaactggggaatgactggtttaacactgaggtgctggcgggaatcgca
gggcagatctcgctgatggttatcgatgaggcccattgcatctcagattggggtcacgac
ttccgtcctcactaccgattgcttgagcgtatcgccagaacactgccggccaatctgcgc
ctgctggcaacaacggcaactgcaaacaaccgggttatggaagatcttgtggctgtgctg
ggcccgaatatgaaggtactgcgcggtgacttgaatcgagattccttgacgctgcaaact
atgcgcttgccaagtcaagctgtccgaatggcatggatcgcacagcagctcaactcactc
ccaggtcacggcatcatttacaccctgactattcgcgatgccaatcaactggcagattgg
ctcaaggccaagggctttgctgtagaagcatacacaggcaagacaggtgatcggcgtgag
gagttggagcaggcgctgcaagaaaatcaggttaaggcccttgtagcgaccaccgcactg
ggtatgggctacgacaagccggacctcgcgttcgttatccattttcagatgcctggctca
gttgtcgcctattaccagcaagttgggcgagcaggcagagctctgagatctgcatatggc
gtgctcctgagcggcgatgaagaagaagggattacggattggtttatccgtagtgccttc
ccaacgcgccaagaggttgacgatgtcctgggagcactaaatgaagcaccggaaggactc
tcaatacctgaactcatgacctgcgtaaacatgagcaaagggcgcatcgagaagacaatt
acagcactctccctcgagtcgccagcaccgattgccaagcaaaacacaaaatggcagctc
actgccgccgagcttgtagaaggtttttgggcaagagcagaccggctcaccaaattgaga
cgtgctgaactccagcaaatgcaggagtacgtcgctcggcctttcgggcagcacatgggc
tttctgattaatgcgcttgatggcgattccagcactgtgagcccaccttctttgcctgcg
ctgtcagaagaagtagatgacttgctgattcgggaagccgaggaatttctgtgtcgcaca
agcctgcctatcgaacctcgcaagaaatggcctgcgggagggatgccgcagtacggaatt
cacaccgcgtccactatcccgtatcaggcacaacccggcaaagcactctgcgtttggggt
gatgccggctggggcagtttggttcgacagggcaaataccacgatggccgcttttctgac
gaacttataactgcgtgcgtgaagatgatcgctgaatggaatccgcaaccagccccaact
tgggtgacttgtgttccttcgcttcgtcatcccgacttggtaccggacttcgctcagcgc
ttggctgctgcgctggatttaccgtttcatatggtcatcgcaaaaacggatgcaagaccc
gaacagaaaacgatggcaaacagtacccaacaggcgcgcaatattgatggctcgctcgca
cttaacggccagcctatcctgcgcggtccggttctcctgattgacgacatggtcgactcg
cggtggacgctgacagtgtctgcgtggctcctccgcaagaacggcagtggtgctgtgtgg
ccaatggccctctcacagacggggcacgacgaatga
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