Chitiniphilus purpureus: N8I74_07490
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Entry
N8I74_07490 CDS
T08496
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chic
Chitiniphilus purpureus
Pathway
chic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I74_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chic03019
]
N8I74_07490
Enzymes [BR:
chic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N8I74_07490
Messenger RNA biogenesis [BR:
chic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8I74_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
UXY16849
LinkDB
All DBs
Position
complement(1622757..1624130)
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AA seq
457 aa
AA seq
DB search
MTFATLGLAPEVLKAVAQEGYEHPTPIQAQAIPHVLSGRDLLGAAQTGTGKTAAFVLPIL
TRLAPHANTSVSPARHPLRALILTPTRELADQVFESAKTYGKHLPLRSHVVFGGVDINGQ
IPPLRAGVEVLVATPGRLLDHVQQKTVNLAQVEILVLDEADRMLDMGFILDIKKIISLLT
NRKQTLLFSATFSPEIKRLAGEFLNAPALVEVARQNATNDNVEQILHPCETFRKRALLAH
LIRTHDMGQVIVFNRTKQGADQVARDLKRDGFNCEAIHGDREQRARLEVMARFKEGQLKI
LVATDVAARGLDINELPFVVNFELPNSPEDYVHRIGRTGRAGAKGVAISLVDPGEEKALA
GIQKLIKKELQLTPVPGYSPGTTRAPEARREESDPRREGERYRGRERAPARATHAALEPS
IPALPRLREKPLSQIPALFLPPRAPAPQASAGDTSQD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgcaacgctggggctggcgcccgaggtactgaaggcggtggcgcaagaaggg
tacgaacacccgacgccgatccaggcgcaggcgattccgcacgtgctttccgggcgcgat
ctgctgggcgcggcgcagaccggcaccggcaagaccgcggccttcgtgctgcccatcctg
acccggctcgcgccgcacgccaataccagcgtgtcccctgcccgccacccgctgcgcgcg
ctgatcctgaccccgacccgcgaactggccgaccaggtgttcgaaagcgcgaagacctac
ggcaagcatctgccgttgcgcagccatgtggtgttcggcggggtcgacatcaacggccag
attccgcccctgcgcgccggtgtcgaggtcctggtggccacacccggccggctgctcgat
cacgtgcagcagaagacggtgaacctcgcgcaggtggagatcctggtgttggacgaggcc
gaccgcatgctggacatgggcttcatcctcgacatcaagaagatcatctcgctgctgacc
aaccgcaagcagacactgctgttctccgccaccttctcgcccgagatcaaacgtctggcc
ggtgaattcctgaacgcgccggcgttggtcgaggtggcccggcagaacgccaccaacgac
aacgtcgagcagatcctgcatccgtgcgagaccttccgtaagcgcgcactgctggcccac
ctgatccgcacccacgacatgggccaggtgatcgtgttcaaccgtaccaagcagggtgcc
gaccaggtggctcgcgacctgaagcgcgacggtttcaactgcgaagccatccacggcgat
cgcgagcagcgcgcgcgcctggaagtgatggcccgcttcaaggaaggccagttgaagatc
ctggtcgccaccgatgtagcggcacgcgggctggatatcaacgaactgccgttcgtggtg
aacttcgaactgcccaacagccccgaggactacgtacaccgcatcggccgcaccggccgc
gccggtgccaagggcgtggcgatctcactggtcgatccgggtgaggagaaggcactggcc
ggtatccagaagctgatcaagaaagagctgcaactgacaccggtgccgggttattcgccg
ggcaccacccgggcgcccgaggcgcggcgtgaggaatccgatccacggcgcgaaggcgaa
cgctaccgcggccgcgaacgcgcgcccgcgcgcgccacgcacgcggcgctcgaaccatcc
atcccggccttgccgcggctgcgtgaaaagccgctcagccagatcccggccctgttcctg
ccgccgcgtgcgccggcgccacaggcgagcgcaggcgacacctcgcaggattga
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