Chitiniphilus purpureus: N8I74_15000
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Entry
N8I74_15000 CDS
T08496
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chic
Chitiniphilus purpureus
Pathway
chic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I74_15000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chic03019
]
N8I74_15000
Enzymes [BR:
chic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N8I74_15000
Messenger RNA biogenesis [BR:
chic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8I74_15000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Sacchrp_dh_NADP
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UXY14617
LinkDB
All DBs
Position
3244385..3245980
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AA seq
531 aa
AA seq
DB search
MSFASLGLSESLVRAVTELGYTEPTPIQTQAIPAILSGGDLMAGAQTGTGKTAGFTLPIL
QRLSEHPREGSTKVRALILTPTRELAAQVEESVRNYGKHVKLKSVVIFGGVAINPQIEKL
KKRIDVLVATPGRLLDHANQGTVDLSGVEILVLDEADRMLDMGFIHDIKKVLALLPAKRQ
NLLFSATFSDEIKALADKLLDNPALIEVARRNATADTIAQKVHPVDRDKKRQLLTHLIKQ
HNWFQVLVFTRTKHGANRLAEQLVKDDISALAIHGNKSQGARTRALSEFKAGTLQVLVAT
DIAARGIDIDELPHVVNYELPHVPEDYVHRIGRTGRAGAEGEAISLVCVDELKLLADIEK
LIKRELPKAVIEGFEPDPDAKPEPIQQRSGQRPQRSGQGRQGGGEGRRTPAPQPQQQQAQ
AQRGERAQEGPARGQQPRQKQRQAQQQQQQGQQNRGGQQQQTGRKQQQQQQQQNAGGKGK
GNRPANPARSGNVDRRDSDSSVWDERQPTSNENTPVAALFSVPRRPTGRHH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcttctctcggtttgagcgaatcgctcgtacgcgccgttaccgaactcggt
tacaccgaacccactccgatccagacccaggcgattcccgccatcctttccggcggcgac
ctgatggccggcgcccagaccggcaccggcaagaccgcgggcttcaccctgcccatcctg
cagcgcctgtccgagcatccgcgcgaaggcagcaccaaggtgcgcgcgctgatcctgacc
ccgacccgcgagctggctgcccaggttgaggaatcggtccgcaactatggcaagcatgtg
aagctcaagtcggtggtgatctttggcggggtcgccatcaatccacagatcgaaaagctc
aagaaacggatcgatgtgctggtcgccacgccgggtcgcctgctcgaccatgccaaccag
ggcaccgtcgacctttccggggtggagatcctggtgctggatgaagccgaccgcatgctc
gacatgggctttatccacgacatcaagaaagtgctggcgctgttgcccgcaaaacgccag
aacctgctgttctcggccactttctccgacgagatcaaggcgctggcggacaagctgctc
gacaaccccgccctgatcgaagtcgcgcgccgcaatgccacggcggataccatcgcgcag
aaggtgcacccggtcgaccgcgacaagaagcgccagctgctcacccacctgatcaagcaa
cataactggttccaggtgctggtcttcacccgcaccaagcacggcgccaaccggctggcc
gagcaattggtcaaggacgacatctccgccctggcgatccacggcaacaagagccagggc
gcacgcacccgcgccctgtccgaattcaaggccggtaccctgcaggtgctggtggccacc
gatatcgccgcgcgcggcatcgacatcgacgaactgccgcacgtggtcaactacgagctg
ccgcacgtgcccgaggactatgtacaccggatcggacgcaccggccgggcgggcgcggag
ggcgaagccatctcgctcgtctgcgtggatgaactcaagttgctggccgacatcgaaaag
ctgatcaagcgcgaactgcccaaggccgtgatcgaaggattcgaacccgatccggacgcc
aagcccgaaccgatccagcaacgcagtggtcaacgcccgcaacgcagcgggcaagggcgc
cagggtggcggcgagggccgtcgcaccccggcaccgcagccgcagcaacagcaggcacag
gcgcagcgcggtgaacgggcgcaggaaggaccggcacgcgggcagcagccgcgtcagaaa
cagcgccaggcccagcagcagcaacaacaaggccagcagaaccgtggtggtcagcaacag
cagaccgggcgcaaacaacagcagcagcaacagcagcagaacgccggtggcaagggcaag
ggcaatcgccctgccaacccggcccgcagcggcaatgtcgaccggcgcgacagcgacagc
tcggtctgggatgagcgccagcccaccagcaacgagaatacgccggtggcagcgctgttc
tcggtgccgcgccgccccaccggccgtcatcactga
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