Chitiniphilus purpureus: N8I74_17010
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Entry
N8I74_17010 CDS
T08496
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
chic
Chitiniphilus purpureus
Pathway
chic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I74_17010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chic03019
]
N8I74_17010
03009 Ribosome biogenesis [BR:
chic03009
]
N8I74_17010
Enzymes [BR:
chic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
N8I74_17010
Messenger RNA biogenesis [BR:
chic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N8I74_17010
Ribosome biogenesis [BR:
chic03009
]
Prokaryotic type
rRNA processing factors
N8I74_17010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UXY14997
UniProt:
A0ABY6DKZ0
LinkDB
All DBs
Position
3661233..3664217
Genome browser
AA seq
994 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQKLIDLDIETVGKEQRKSNIYKGVITRIEPSLEACFVDY
GCERHGFLPFKEIARSYMSEGEGSRGRVADLLREGQEVIVQVEKDERGNKGAALTTYISL
AGRYLVLMPNNPRGGGVSRRIEGDERQELRAVLDQLETPSGMSLIARTAAIGRSVEELQW
DLNYLLQLWKAIEGAATSQNGAFLIYQESSLVIRAIRDYFQPEIGEILIDKADIYEQARQ
FMSHVMPGNVGRVKYYQDDVPLFSRFQIEHQIESAYAREVTLPSGGAIVIDKTEALYSID
VNSARATKGSDIEETALRTNLEAADEIARQLRLRDVGGLIVVDFIDMENPKNQREVENRL
REALHFDRARVQTGKISRFGLMELSRQRLQPSLEETSHIACPRCHGTGVIRGIESSALHI
LRIMQEEAMKENTGAVHAQVPVDVATFLLNEKRAEIHAIEARLKVEVVLIPNIHLETPNY
SLTRLRHDDLNMIEDVLPSYKMMEVPPEEGYQPGRAKEEQAKRPEAAVKGVTPAQPAPIS
ARDNPQPSPTPPAAPSLWSRFIGWLTGSGEPQPVAAEPKRAQPAKGQNGQRRERNERNER
GERSQRSPRGERNGEERSERQPNERRTGNKPRIEEDQGNRTQRAGRNERGQERNPERGQQ
ERAERPERQERPERQPQEAAQQAETRAAREPRQPRQNRAERAPRQENAPVAPPAEPTAVA
AAVVPVVNAEPDVPGTDAATEAGEGRSRRRRGRRGERRERNEATDGETGDTRMIEAGAAE
TDDAIATQADTPTTTVAEPSPVDVAVPPAAAPEAAPAAPVVAAAPVTEPDQPAATANTAA
AVVTDEVPADEAPAAQVVEPAAMPAEPVPALETAAPPAQATLVFEATPAAPALDVGSPEE
AGLVMVATRDDLSQLVVSEPVTEAPRRRRRDVARPQEGAQQAEPLQLVETRADNAAVDAV
AAAQTAKPRTRRNAAATQTTPSDAPLTQVETRAP
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatgttgttcaacgccacgcaggccgaagagctgcgcgtggccatcgtcgat
ggtcagaaactgatcgacctcgacatcgagaccgtcggcaaggagcaacgcaagtccaac
atctacaaaggggtcatcacccgtatcgagcccagtctcgaggcctgctttgtcgactat
ggttgtgaacgccacggtttcctgcccttcaaggagatcgcccgctcctacatgagcgaa
ggtgaaggcagccgcggccgcgtggccgatctgctgcgcgaaggccaggaagtgatcgtg
caggtggagaaggacgagcgcggcaacaagggcgccgccctcaccacctacatcagcctg
gctggccgctatctggtgctgatgcccaacaacccgcgcggtggcggcgtctcgcgccgc
atcgaaggcgacgaacgccaggaactgcgcgcggtgctcgaccagctcgaaaccccgtcc
ggcatgagcctgatcgcccgtaccgccgccatcggccgctcggtcgaggaactgcagtgg
gacctcaactacctgctgcaactgtggaaggccatcgaaggcgccgccacttcgcagaac
ggcgccttcctgatctaccaggaatcgagcctggtcatccgcgccatccgcgactacttc
cagcctgagatcggcgaaatcctgatcgacaaggccgacatctatgaacaggcgcgccag
ttcatgagccacgtgatgccgggcaatgtcggccgcgtgaagtactaccaggatgacgta
ccgctgttctcgcgcttccagatcgaacaccagatcgaaagcgcctatgcgcgcgaagtc
acgctgccgtcgggcggcgccattgtcatcgacaagaccgaggcgctgtattcgatcgac
gtcaactcggcgcgggccaccaagggcagcgacatcgaggagacggcactcaggaccaac
ctcgaagcggccgatgagattgcccgccagctgcgtctgcgcgacgtcggtggcctgatc
gtcgtcgacttcatcgacatggaaaacccgaagaaccagcgcgaggtggaaaaccggctg
cgcgaggcgttgcacttcgaccgcgcacgggtacagaccggcaagatcagccgtttcggg
ctgatggaattgtcgcgccagcgcctgcagcccagcctggaagagacgagccacatcgcc
tgcccgcgctgccacggcaccggcgtgatccgcggcatcgaatcgtcggcgctgcacatc
ctgcgcatcatgcaggaggaggcgatgaaggagaacaccggcgcggtgcatgcgcaggtg
ccggtcgacgtggccaccttcctgctcaacgaaaagcgcgccgagatccacgcgatcgag
gcacggctcaaggttgaggtggtcctgattcccaacatccacctcgaaaccccgaactac
agcctgacccggctgcgtcacgacgatctgaacatgatcgaggacgtgctgccgtcgtac
aagatgatggaagtcccgcccgaggagggctaccagcccggccgtgccaaggaggaacag
gccaagcgcccggaagccgcggtcaagggcgtcacccctgcgcagccggcaccgatctcg
gcccgcgacaatccgcagcccagccccaccccgccggcagcgccctcgctgtggtcgcgc
ttcatcggctggctcaccgggtccggtgaaccgcaaccggtggcagcggagccgaagcgt
gcccagccggccaagggccagaacggccagcgccgcgagcgcaatgaacgcaacgagcgt
ggcgagcgcagccaacgcagcccgcgtggcgagcgcaacggcgaagagcgcagcgaacgc
cagccgaacgagcgccgcaccggcaacaagccgcgtatcgaggaagaccagggcaaccgc
acccagcgtgccggccgtaacgaacgcggccaggaacgcaacccggaacggggccagcag
gaacgcgccgaacgtccggagcgccaggaacgtccggagcgccagccccaggaagccgcg
cagcaggctgagacgcgcgccgcgcgcgaaccgcgccagccgcgccagaaccgcgctgag
cgtgcgccccggcaggaaaacgcccccgtggcgccccctgccgagccgaccgcagtggct
gccgccgtggtaccggtcgtcaatgctgaaccggacgtgccgggcaccgacgcggcaacg
gaagccggcgaaggccgcagccgccgtcgccgcggtcggcgcggcgaacgccgcgagcgc
aatgaagccaccgacggcgagaccggcgacacccgcatgatcgaggccggcgcggccgaa
accgatgacgccattgcgacgcaggcggacacgccgacgacgaccgtggccgagcccagc
ccggtggacgttgccgtcccgccggcagcggcaccggaagccgcccctgccgcacccgtt
gtcgcagcggcgccggtcaccgaaccggaccaacctgctgcaacggccaacaccgcagca
gcagtggtcaccgatgaggtgccggcagatgaagcgcctgcggcgcaggtcgtcgaaccg
gccgccatgccggctgaaccggtaccggcgcttgaaaccgccgcccccccggcccaggcc
acgctggtgttcgaggccacacccgctgcaccggcactggatgtcggctcgcccgaagaa
gccggactggtgatggtggccacccgcgacgatctgtcgcaactggtggtcagcgaaccg
gtgacggaagctccgcgccgccgtcggcgcgatgtggcacgcccgcaggaaggtgcgcag
caggccgaaccgctgcaactggtcgagacccgggccgacaatgccgccgtggacgccgtc
gcggcggcgcagaccgccaagccgcgcacccggcgcaatgccgcggcaacgcagaccacg
ccgagcgatgcaccgctcacccaggtggaaacccgcgcgccttaa
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