Chitiniphilus purpureus: N8I74_19100
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Entry
N8I74_19100 CDS
T08496
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chic
Chitiniphilus purpureus
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chic03032
]
N8I74_19100
03400 DNA repair and recombination proteins [BR:
chic03400
]
N8I74_19100
Enzymes [BR:
chic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N8I74_19100
DNA replication proteins [BR:
chic03032
]
Prokaryotic type
DNA Topoisomerases
N8I74_19100
DNA repair and recombination proteins [BR:
chic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N8I74_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
YlzJ
Motif
Other DBs
NCBI-ProteinID:
UXY15391
LinkDB
All DBs
Position
complement(4139395..4140405)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEPPELVRVSADAPGYRRIRCGRGFRYVDPDGANVRDPAILARIRALAIPPAWERVWIC
MVPHGHLQATGYDSKGRKQYRYHEEWQVHRAADKFAHLARFARALPRLRQRVARDLAAHG
LPRSKVLAALVRLLEATLVRVGNEEYARANRSFGLTTLRKRHVQLGSSVVQLRFRGKSGV
EHRIQFRDRTLAGVLRRCMELPGAQVFRYRDAQGVVRRLTSTDVNDYLRDASGTQATAKD
FRTWGATREATALCLAHPPCRNATEAKRCTKAIVDAVAGRLGNTPAVCRSAYIHPAVLTH
FANAWCDGREPPGLPRVRGLDRTERVTLALIEARAD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagccgccggaactggtccgggtgtcggcggatgcgcctggctaccggcggata
cgctgcgggcgcggcttccgctacgtggacccggatggcgccaatgtgcgcgatcctgcg
atcctggcacgcatccgtgcgctggcgattcccccggcatgggagcgggtctggatctgc
atggtgccgcatggtcatctgcaggcgaccggttacgacagcaaggggcgcaagcaatac
cgctatcacgaggaatggcaggtgcatcgcgcagccgacaagttcgcgcatctggcgcgg
ttcgcccgcgccttgccgcgcctgcgccaacgggtggcacgcgatctggcggcgcatggc
ctgccgcgcagcaaggtgctggcggcactggtgcggctgctggaagcgaccctggtgcgg
gtgggcaatgaggaatacgcgcgtgccaaccgcagcttcgggctgaccacgctgcgcaag
cggcacgtgcaactgggcagcagcgtcgtgcaactgcggtttcgcggcaagtccggcgtg
gagcaccgcatccagttccgcgaccgcaccctggccggcgtgctgcgccgctgcatggag
ctgcccggcgcccaggtgttccgctatcgcgacgcgcagggggtggtgcggcggctgacg
tcgaccgatgtgaacgactacctgcgcgacgcgagcggcacgcaggcgaccgccaaggat
ttccgcacctggggcgccacgcgcgaggccaccgcgctgtgccttgcccatccgccctgt
cgcaacgccaccgaggccaagcgctgcaccaaggccattgtcgatgccgtggccggccgg
ctcggcaacacgccggcggtctgccgcagcgcgtacatccatccggcggtgctgacgcac
ttcgccaacgcgtggtgcgacgggcgtgagccgccggggctgccgcgtgtgcgcgggctt
gaccggaccgagcgggtgacgcttgcgctgatcgaggcacgcgccgactag
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