Colletotrichum higginsianum: CH63R_00188
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Entry
CH63R_00188 CDS
T08176
Name
(RefSeq) Snf5/smarcb1/ini1
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_00188
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_00188
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
CH63R_00188
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CH63R_00188
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GATA
Motif
Other DBs
NCBI-GeneID:
28859270
NCBI-ProteinID:
XP_018163525
UniProt:
H1V4P5
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Position
1:complement(607730..609539)
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AA seq
582 aa
AA seq
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MDTRPKPQAFLSTYAPRIRSYNNSLLTPALASAPAGPTSRVTKRGTTIINYAEDGYDDID
EDDDTSRRRPTGLRSLRREELSNIQDLSDKAAKDTNEPVEVQGIWRDWFGKGRQVRSDQQ
NSAQADLPLTLIPIRIELDIPAFVPQVPFPSAPHTVDTSLPQYRPQEMTPPYRLRDTFLW
NLHETVITTEQFAQTYVQDLDLPNRHNTMLEIAKQIRTQLEEYAGVALHPLFHAQSQSQN
PGNNDATKASSVFNRDDSPTPATRGISRSDTPMQNGGLGTPSRIRDLTSAPDVTAHASPV
PVDTDEYDHDDAYRCIVSLSINLSSTLYTDKFEWSLLHPPGMPEAFASQTCQDLGLTGEW
VPAVTHAIYEAVLRLKKEACEAGGLVMGWSGAREFPNEATAGADAGWRYDPENLADPWEP
KVEFLSKEEMEKREGDRERQIRRLRRETARFSSTTGLVGGVPFSGFGNVVEAPEEERMGR
GERSKKKRRFRSLSPLGRSGTPGGRGTPDVGSGYGAGSGLTDQERLSWRCWHCALWGSSV
WAVRPGPAGPRSLCQNCGLIYERDGKLPRQTKNMHLTIIRTA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacacccgcccgaagccacaggccttcctgtccacctacgccccgcgcatccggagc
tacaacaactctctcctcacacccgccctggccagcgcccccgccggcccgacctcgaga
gtcacgaagcgtggaacgaccatcatcaactacgccgaagatggctacgacgacattgac
gaggacgatgacaccagccgtcgtcgcccgactggcctgcgaagcttgaggagggaggag
ctctccaacattcaggacctgtcggacaaggctgcaaaagacacgaacgagcccgtcgaa
gtgcagggcatctggcgagactggtttggcaaggggcgccaggtccggagtgaccagcag
aactcggcccaggctgacctgcccttgacgctgatccccatccgtatcgagctcgacatc
ccggcctttgtgccccaggtcccctttccctcggcccctcacaccgtcgacacgagcctg
ccccagtaccgaccgcaagagatgacgccgccctaccggctccgcgacacgttcctctgg
aacctgcacgagaccgtcatcaccaccgagcagtttgcgcagacgtacgtccaggatctc
gacctgccgaaccgacacaacaccatgctcgaaatcgccaaacagatccgcacacagctt
gaggagtatgccggtgtcgccctgcacccgctgttccacgcgcagtcgcagtcgcagaac
cccggcaacaacgacgcgaccaaggccagctcggtgttcaaccgcgacgattcccctacg
cccgctaccagaggcatcagccgctccgatacccccatgcagaacggcggtctcggtacg
ccgtccaggatcagggatctcacgtcggcgccagacgtcactgcacacgcgagccccgta
ccggttgacacggacgaatacgaccatgacgacgcctaccggtgcattgtctccctcagc
atcaacctttcatcgaccctgtacacggacaagtttgagtggtccctgctgcacccaccg
ggaatgcccgaggcctttgcgagccagacgtgccaagaccttggcctgactggggaatgg
gttcctgccgtgacgcacgccatctacgaagcggttctgcgtctgaagaaggaagcttgc
gaggccggcggcctggtaatgggctggagcggagctcgcgagttccccaacgaggccacc
gccggggctgatgctgggtggcggtacgacccagaaaatctcgccgacccctgggagccc
aaggttgagtttctgagcaaggaagagatggagaagcgtgaaggagacagggagcgacag
attcgccgcctgcgccgcgagaccgctcggttcagctcaaccaccggcctggtcggcggc
gtacccttctccgggttcggcaacgtcgttgaggcgccggaagaggaacgcatgggtagg
ggcgagcggtccaagaagaagcgccgcttccgcagcctgagtcctctgggccggtccgga
acccctggcggacgcggcacgccggacgtgggatccggatatggtgcaggcagcggtctg
acagaccaggagcgcttgtcctggagatgttggcactgcgccctctggggctcgagtgtg
tgggcggtgagacctggcccagcagggccgaggtcgctgtgccagaattgcggcttgatc
tacgagcgcgatggcaagctccctcgacaaacgaagaacatgcaccttactataatccga
acggcataa
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