Colletotrichum higginsianum: CH63R_00213
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Entry
CH63R_00213 CDS
T08176
Name
(RefSeq) Transcription factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
chig
Colletotrichum higginsianum
Pathway
chig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CH63R_00213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_00213
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CH63R_00213
Prokaryotic type
Archaeal type
TFB
CH63R_00213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
YceG
RB_B
RGL11_C
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
28859295
NCBI-ProteinID:
XP_018163550
UniProt:
A0A1B7YSN6
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Position
1:686143..687198
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AA seq
351 aa
AA seq
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MLGPNGAATDENGNPEGFRDDLNMVVMCPDCKEYPPHLVEEFSSGDMVCGSCGLVVGERI
IDTRSEWRTFANDDQGNDDPSRVGDAVNPLLNGSQLETTIAFGDGRDSKQLARLQNKSQN
DKASKSLMQAYKEIGAFCDSINLGKNVSDAAKHIFKLTYDHNFMKGKPQEAVIAGCIFIA
CRQTGVGRTFREIFQVTHVSKKEIGRVFKQLESFLQKIKEENPRGAGSLSNLDGYKASAS
TSAEDLCTRFCSNLNFRNAQKIENVSRALARKTSSVSELAGRSPLSVAAACIYMASHLMK
EVRTSKEIASVAGVSDGTIKTAYRFLYQARDRLIEKEWGADQKAIDGLPIN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctcggccccaacggtgccgcaacggatgagaatggaaatcccgagggatttagggac
gacctcaacatggtagtcatgtgtcccgactgcaaggagtacccgcctcacctggttgag
gagttctcctcgggcgacatggtctgcggctcctgcggccttgtcgtcggtgagcgcatt
atcgacactcgctccgaatggcgtacctttgccaacgacgaccagggcaacgacgaccct
tctcgtgtcggtgacgccgtcaaccccttgctcaacggctctcagctcgagacgaccatt
gcctttggcgacggcagagactcgaagcagcttgcccgcctgcaaaacaagtcgcagaac
gacaaggctagcaagtcgctcatgcaggcctacaaggagattggcgccttctgcgacagt
atcaaccttggcaagaacgtctcggacgccgccaagcacatcttcaagctcacgtacgat
cacaacttcatgaagggcaagcctcaggaggctgtcatcgcaggctgcatctttatcgcc
tgccgtcagacgggtgttggtcgtaccttccgagagatcttccaggtcacgcacgtatcc
aagaaggagattggcagagtattcaagcagctcgagtcctttttgcagaagatcaaggag
gagaacccccgtggtgcgggttccctgtccaacctggacggctacaaggccagtgcgtcg
acgagcgccgaggacctctgtacccgcttctgttcgaacctcaacttccgcaatgctcaa
aagatcgagaacgtgtcgcgagcgcttgcacggaagacgtcgagcgtctcagagttggct
ggacgctcgccgctgtcggtggcggccgcctgtatctacatggcgtctcatctcatgaag
gaggtgagaacttccaaagagatcgcctccgtggctggtgttagcgacggcaccatcaag
acggcctatcggttcttgtatcaggcccgcgacaggctgatcgagaaggagtggggtgct
gaccagaaggcgatcgacggccttccgattaactag
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