Colletotrichum higginsianum: CH63R_00261
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Entry
CH63R_00261 CDS
T08176
Name
(RefSeq) RNA binding protein ligatin
KO
K15027
translation initiation factor 2D
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
chig03012
]
CH63R_00261
Translation factors [BR:
chig03012
]
Eukaryotic type
Initiation factors
eIF-2D
CH63R_00261
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PUA_elF2D
SUI1
WHD_eIF2D
SWIB_eIF2D
Pre-PUA
SWIB
WH_KIN17
Motif
Other DBs
NCBI-GeneID:
28859343
NCBI-ProteinID:
XP_018163598
UniProt:
A0A1B7YSS6
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Position
1:complement(<819497..>821407)
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AA seq
636 aa
AA seq
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MFKKKPTVKSLSPLRSSDRRKLADQVIKDYGLDSKLVATSDEQTPEQKAEALAVQTALRK
SLFPDNLQSARFTTTYGPDLKPTSGTYYVGSHDGEERRVLWFQMEGIVYPTVYTLWANPD
IVPLLHTPGIVVKKLQGGADLMTPGLFGGPPFPDKAKKGAVVAVASLENPSVPVAVGACE
IDVSALQNVRGAKGHAVKNLHWADDEMWGFSIDNKPGRRAPEEIAGWLKVLEARGLVESL
SGLSLDGPDEDGGVSLEDDATADDAGPAAPPEDDVIPDFTQPEIDEAFRKSFLFGIHQHK
SSNSPPNYGLVFPLSQSYVMSTLIQPFLPAHTPRQAQQLQIKKTSWKNIKKFIKSLDKEG
LLKSKEKGQETVVTEVKFENPAIVDFKPYRLPKKETAGGTSLGRGEKATSKVDVGGDDAV
GQKLQIVSYFKPTSKLQPIFDSASKSLFTQSEVRNAVTAYIEGENLVSETNKRIVKLNPI
LANGVFTGSGSADKDALAKGTVARDTLIDRVLSGMSTSYAIVRNGTDPGSVKARSGSPPK
IRITLETRSGNKTVTAVSGLEPYHISPKPLADELRKVCAGSASVEPLAGAAKKTEAQVME
VMVQGPQQAAVVKALQKRGVETRWMDLVDKTKGKKR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaagaagcctacggtgaagtcgctctcacccctgcggtcctccgaccgtagg
aagctcgccgatcaggtcatcaaggactacggccttgactccaagctcgtggcgacctcg
gacgagcaaacccccgagcaaaaggcggaagcgctcgccgtgcagaccgctctccgaaaa
tctctgttccccgacaacctccagtctgcccgcttcaccaccacctacggccccgatctg
aagccgacctccggcacctactacgtcggcagccacgatggcgaggagcgccgcgttctg
tggttccagatggaaggcatcgtctaccccacggtgtacaccctctgggccaatccggat
atcgtcccgcttctccacaccccgggcatcgtcgtaaaaaagcttcaggggggcgccgat
ctgatgactcctggcttgttcggcgggcctccgttccccgacaaggcgaagaagggtgcc
gtcgtcgccgttgcgagcttggagaacccgtcggtgcccgtggctgtgggagcatgcgag
atcgacgtcagcgcactgcagaacgtgcggggtgcaaagggacatgccgtcaagaatctg
cactgggctgacgacgagatgtggggtttcagcatcgacaacaagccgggcaggagggct
ccggaggagattgcgggatggttgaaggtgctggaggcgcgaggactggttgagagcttg
agcgggctgtctttggatggtccggatgaggatggaggagtttctcttgaagatgacgct
accgccgacgatgccggcccggcagcaccacccgaagacgatgttattcccgacttcaca
caacccgagatcgatgaggcattccgcaagtcattccttttcggcatccaccagcacaag
tcgtcaaactcgccgcccaactacggtctcgtcttcccactgtcccagtcttatgtcatg
tcgaccctgattcagccctttttgcccgcgcacacaccacggcaggcgcagcaattgcaa
atcaagaagacatcgtggaagaacatcaagaaattcatcaagagcctcgacaaagagggg
ctgctcaagagcaaagagaaaggtcaggagacggttgttacggaagtcaagttcgagaac
cccgcgattgttgatttcaaaccgtatcgcctacccaagaaggagacggctggtggcaca
tcacttggtaggggagaaaaggctacgagcaaggtcgatgttggtggcgacgacgcggtt
ggacagaagctgcagattgtctcatacttcaagcccacatccaagctgcaacccatcttc
gactccgcttccaagtcgctcttcacccagtcagaagtacgcaatgcggtgactgcctac
atcgaaggcgagaacttggtgtccgagacaaacaagcgcatcgttaagctcaacccgata
ctcgccaacggcgtattcactggctctggatcagctgacaaggacgccctcgccaagggc
actgtggcccgagatactctcatcgacagggtcttgagcggcatgtccacatcgtacgcg
atcgtccggaacgggacagaccccggcagcgtcaaggccagaagcgggtcgccgccaaag
attcgcatcaccctcgagacaaggagcggaaacaagactgtcactgcagtgtccgggctg
gaaccataccacatcagcccgaagccgctggctgacgagttgagaaaggtttgcgctggg
tctgcgagcgttgagccgctggctggtgcggcgaagaagaccgaggcgcaggtcatggag
gtcatggtacaggggccgcaacaggctgcggtggtcaaggcgctgcagaagagaggtgtt
gagacgaggtggatggacctcgtggataagaccaaggggaagaagcggtag
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