KEGG   Colletotrichum higginsianum: CH63R_00430
Entry
CH63R_00430       CDS       T08176                                 
Name
(RefSeq) Nuclear pore complex subunit
  KO
K18715  nucleoporin NUP159
Organism
chig  Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:chig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_00430
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CH63R_00430
SSDB
Motif
Pfam: Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_RIG_2nd STX6_10_61_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 28859512
NCBI-ProteinID: XP_018163767
UniProt: A0A1B7YT80
LinkDB
Position
1:complement(<1370313..>1375125)
AA seq 1561 aa
MAFSFGNQGNTMPGSTAGGGGLNQGPELEVIQTEALGFKSIAGDAKLRLTSAWSPPPADT
ASLMSIAPRRGLVAAAGPDGITIASTESVRKGFEREKEGDADVRAFEPQGKLPMPMRVSQ
LAFTADENYLILSAESGGGLAVYEVQTLLQGGTKAAFELATNGETLRALIPNPTIEKAEL
CAIVTDNGNLHIANLKERQTSTSLKTQVSCVSWSTKGKQLVAGLADGTIFQMTPEGEAKG
EIPRPPNVANAHVSSLSWLENHLFLAIHTSTSESPPTSVYHLVTRKLPSDFTFQKLTDPV
DPFGAEKTPHHTILRLKDFPPNLQDLLIVASTASPDIGLLSRAKSPLTADHPVDTAGVFT
TTELADDSKRASLPMNDSFENTVPIGAALDLSSKDKVYKPLPADEEIEDSPGPLPGLWVL
NHEGVLSSWWIVYEESIRQGTTYPGMAALDTSASPAAAASTASTAAPAATPAPSNSAFGA
PSSTTAFGSTSSLGSAQKPSPFSTSGSKIPTFGGSSTLGTKASPWGSATNAPAASSGTTF
GSGAFGGSSATSGSAFGRPSAPKSAFGGGGTFGSPSASSSAPAFGQPSSIGFGQSSTLGQ
KSSPWATGGTSGSNAAALPAFGQSSFASLGSSATKSPFGGASDSTPNAAPASGGFASFAT
SGGFASLGNKTSEGGSVFANKPSSSPFGSGALPSTISKDTVFPPPSSSGPATSNPFSQPF
KLGTTFKADPSATDDGGKPSTPGASGSSLFGDNFGSALGDAEKKTPPRDQGMDITEETPK
AKSIFSLGESTTPTTTPAPSKFGFSSATPSTSAPKPGLFGFPPQPATGGLFGSAKPVEKT
PDIKVESEHKSLGDAPLPPESTSKNEYPLGESSSSSGTGNVPSDGGSKASPKADSAPLPA
DFLSTPKATITKETAPAPPPSDFLNSQKRTSPVNEAPLPPDFLTPKPGKSAESTTPFEAL
PLPADDLASSAEPELENLKSTAPATAPDFLKMPKQSLSSATWSSTPQSVTPAVDDAPLPP
DFMSKPRERDLSTIPTIPENEHDSDLQEDEDEDEDEEENDGSEGSGVMVSKDLSPSMTAM
TPTAGMTPQSSFGGVSSSTYSIPRTEEERPRASLFGDLSRNAPMFPRPSQTSPRSPSPVR
GGAVPGRMLRQESARSVSAPGMASQILAAQKKQPSQIGSSIIGNKPVEDHFISQQRLARQ
KRQAEETKTLEDEEDDEIQKILASKIEPSLKLDDFIAHSNVVPSAKETIPAQVEAVYRDI
NSMIDTLGLNARSLASFLMGHDIGFKAGGRRKEDLEDPESWVLSEIDELREVIDRSLAQE
LEGGRVHDVEEKLEACNELAREMSRLRSKQDDLRKIIMVKADPEQADLSRTLPLSTEQAS
QQNELRREYANFTKLLAEAEEALTILKTRIAAASSASGKGKSNMPTVEAVLRTISKMTSM
VEKRSGDIDVLENQMRKLRFSSVNSREGSPMVTPQRNSRSVMFSPERSALASPGTLRNSF
VSSVASYGGRGTPPRKKLSGFSQEEKSDLMAKRARRQAVLNKLKGNVERTGVSVWAFEDM
E
NT seq 4686 nt   +upstreamnt  +downstreamnt
atggccttcagctttggaaaccaaggaaacacaatgcccgggagcacggctggaggcgga
ggactgaatcaaggccccgagctggaggtgatccagaccgaggcgcttggtttcaagtcg
atcgccggcgacgcaaaactcaggcttacatccgcctggtcaccgccccccgccgatacg
gcttcgctcatgagcatcgcccctcgccggggacttgtcgccgccgcaggccccgatggc
atcacgatcgcctcgaccgaatcggtgcgaaagggcttcgagcgcgagaaggagggcgat
gccgacgttcgcgcgttcgagccccagggcaagctgcccatgcctatgagggtgtcgcag
ctcgccttcaccgccgacgagaactacctgatcctctctgctgagagcgggggcgggctc
gccgtctacgaagtacagaccctgctccagggcggcacgaaagctgcgttcgagcttgcg
acaaacggcgagacgctaagagcccttatcccgaaccctacgatcgagaaggcagaactc
tgtgccattgtgacggataacggcaacctgcacattgcgaatttgaaggaaaggcaaacc
agcacttcgctcaagacgcaagtaagctgtgtaagctggagtacgaagggaaaacagctg
gtggcaggcttggcggacggcactatcttccagatgacacccgagggtgaagcaaagggc
gagattccgcggccgcccaatgtggccaacgctcacgtctcttctctgagttggttggag
aaccacctgtttctcgctattcacacatcaacttccgagtcaccgcccacttcagtctat
caccttgtcacaagaaagctaccgtcggactttactttccagaaactgaccgaccctgtc
gacccctttggcgccgagaaaactcctcaccacacaatactgagactgaaggacttccct
ccgaacctacaggacctcctgattgtggcgtctaccgcctcgccagacattggcctcctt
agcagggccaaatcgcctctgacagccgaccacccagtggataccgccggtgtctttacc
acaacagaattggccgatgactcaaaacgcgcttctcttccgatgaatgacagcttcgag
aacaccgtccctatcggcgctgcccttgacctctcaagcaaagacaaagtttataagccc
cttcccgcagacgaggagattgaggactctcctggtccgttgccaggcctctgggtactg
aaccacgagggcgtgttaagctcatggtggatcgtgtacgaagaatcaatcaggcaaggc
acgacctatcctggcatggccgcactcgacacttctgcgtctccagcagcagcggcgtca
acggcgtcaacggcggcaccggccgcgacgcccgcaccaagcaattcagccttcggcgct
ccttcgagcacaacagcttttggctcaacttcttctttgggctcggcccaaaagccatca
ccctttagcaccagtgggtctaagatacccacatttggcggttcttcaacgcttggtacg
aaggcctcaccctggggcagtgcgaccaacgcgcccgcggcctcttccggcaccactttc
ggcagtggtgctttcggtggtagctcagcgacctccggctctgcgttcggtcggccttct
gcaccgaagtcagcatttggcggcggcggcacgtttggaagcccttccgcttcttcttca
gctcctgcgttcggccaaccctcatcgattggcttcggccagtcgtccaccctcggccaa
aagtcgtcgccatgggcaacaggaggtacgtctggctcgaatgcggctgctttgccagcg
ttcggtcaatccagcttcgccagcctcggtagttccgcgaccaagagcccctttggcggt
gcgtctgactcgactcccaatgctgctcctgcctctggaggcttcgctagcttcgccaca
tctggcggctttgcttcgcttggcaataagaccagcgagggtggaagcgtgttcgcaaac
aagccttcgtcgagcccctttggttcgggtgctctgccatccacgatatcaaaagatact
gtgtttcccccgccaagttcgagcggccctgcgactagcaacccattcagccagccgttc
aagctgggaactaccttcaaggctgacccctctgcgacggatgacggcgggaaaccctct
acccccggtgctagtggttcgtcccttttcggcgacaacttcggctcggcgctcggcgat
gccgagaagaagacccctcctagggatcagggaatggacatcacggaagagacacctaaa
gcgaagtcgatcttcagccttggcgagtccactacccctacgacaactcctgcgccatcc
aaattcgggttttcgtcagcaacaccctcaacatcggcacccaagcctggcttgtttggt
ttcccaccacaaccggcgactggggggttgtttggctccgcaaaacccgtcgaaaagact
cctgacatcaaggtcgagtctgaacacaagtcactaggcgatgctcctctgccccccgaa
tccacgagcaagaacgagtaccctctaggcgaatcctcctcttcctcgggcacaggcaat
gttccgtcagatggtggaagtaaggcttcccccaaggcggatagcgcgcctctgcctgcc
gatttcctgtcgacgccaaaagccacaataacgaaggaaactgcacctgcaccgccgcct
tccgatttcctcaattcccaaaaacgcacttctccagtcaacgaggcgccgctcccgcca
gactttctcacacccaagcccggcaaatccgcggagtcaaccacgcctttcgaggcgctg
ccattgccagcggatgacttggcgtcgtccgctgagccggagctagaaaatctaaagtca
acggcaccggccacagctcccgacttcctgaagatgcccaagcagtctttatcgtcagca
acgtggtcttctacgccacagagcgtaacgcctgcagtcgatgacgctccattgccaccc
gatttcatgtccaagcctagagagcgcgacctgtccaccatcccgaccatccctgagaat
gaacacgatagtgatcttcaagaggatgaggatgaggatgaggatgaagaggagaatgac
gggtctgaaggcagcggcgttatggtctccaaagacctcagcccatccatgacggcaatg
acgcccacagccggcatgaccccgcagagctcattcggcggtgtaagcagcagcacttac
tctattccgcgcaccgaggaggagaggccgcgagcatcactgtttggtgatctcagccgt
aacgctcccatgttccctcggccttcgcaaaccagccctcgttctcccagccccgtccgg
ggtggcgctgtgccggggcgcatgctgcgccaggagtcagctcgctcggttagtgccccg
ggcatggcatcgcagatacttgcagcccagaagaagcagccatcgcagataggctcgtcg
atcattggcaacaagcctgttgaagaccatttcatctcgcagcagaggcttgcgcgccag
aaacgtcaggctgaagagactaagacgctggaagacgaggaggacgacgagatccagaag
atccttgcgtccaagatcgagccttcgctgaagctggacgacttcatcgcgcactctaac
gtggtgccgtcggccaaggagacaatcccggcccaggttgaagctgtgtatcgtgacatc
aactccatgatcgatacccttggtctaaacgcccgctctctcgccagcttcctcatggga
cacgacatcggtttcaaggccggtggccgacgcaaagaagaccttgaggaccccgagagc
tgggtcctttccgagatcgatgagctcagggaagtcattgacagatcgttggcccaagag
ctcgagggtggacgtgttcatgatgttgaggagaagcttgaggcttgtaacgagcttgcc
cgggagatgtctcgtctccgctcgaagcaagatgatctgaggaagatcatcatggtcaag
gcggatccagagcaggcagacctcagccgtacactgcctctcagtaccgaacaagcaagc
cagcaaaatgagttgcgccgcgagtatgccaactttacgaagctgcttgccgaagccgag
gaggcgttgacgattctaaaaacgagaattgctgccgcaagcagtgcgtctggcaagggc
aaatccaacatgcccaccgtcgaggccgttctgcggaccatcagcaagatgacgagcatg
gtggagaagcgatccggtgacattgacgtcctggagaaccagatgcgcaagctccggttc
tcttccgtcaatagccgcgagggctccccgatggtgacgcctcagagaaacagccgctca
gtcatgttctcgcccgaacgatcggccttggcatcgcccggaaccctgcgtaactctttc
gtatcatctgtggcgtcttacggcggccgtggcacgccgccccgcaagaagttgagcggg
ttcagtcaggaggagaagtcagatctgatggcaaaacgggcaaggcgccaggctgtgctg
aacaaactgaagggcaacgttgagcggacgggcgtgagcgtgtgggctttcgaggatatg
gagtga

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