Colletotrichum higginsianum: CH63R_00440
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Entry
CH63R_00440 CDS
T08176
Name
(RefSeq) WD domain-containing protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_00440
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CH63R_00440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
DSE1_N
Beta-prop_CAF1B_HIR1
ASA1
CFAP251_N
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_Aladin
NBCH_WD40
Beta-prop_NWD2_C
WDR54
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_pof12
RMC1_N
Beta-prop_LRRK2
PROPPIN
eIF2A
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_WDR11_2nd
DIKK1-2-4_C-subdom1
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
28859522
NCBI-ProteinID:
XP_018163777
UniProt:
A0A1B7YT89
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All DBs
Position
1:complement(<1402441..>1405379)
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AA seq
960 aa
AA seq
DB search
MVKSYLKYEHSKSFGIVASNTSNLVWAPLGRAGSGTGQAIVAANEDVLCWDIKKGELLSR
WRDERNNVPVTAIAQSKVDTDVFAVGYEDGSIRLWDSKIATVIVNFNGHKSAITTLAFDK
SGVRLASGSKDTDVILWDLVAEVGQFKLRGHKDQITGLQFVEPEGQVEDEENMAMLDSDP
SAEGYLLTTGKDSLIKLWDLSSRHCIETHIAQTNGECWALGLSPDYSGCITAGNEGELKV
WFLDTTALAALKGQVDAPQDTKFLHDRGTLFRQHKDKAVEVVFHPRRDYFAVHGTEKAVE
VWRIRSEAEVKKSLARKRRRRREKAGKEAKEVGDGAAEGDEQADDISTAEASDFFIRYVI
VRTGGKVRSVDWAVNGGSKEVHLLAGTTNNQLELYSIPTKEGSKSKKEDVPEYTRSLAVE
LPGHRTDIRAVSLSSDDKMLATAANGSLKIWNIKTQACIRTFECGYALCCAFLPGDKVVV
VGTKTGELELFDVASASLLDSVSAHDGAVWSLQVHPDGRSVVSGSADKSAKFWDFKIVQE
EVLGTTRTTPKLKLVQSRTLKVSDDILCVRYSPDAKYIAVSLLDNTVKVFFTDSLKLYLN
LYGHKLPVLSMDISYDSKLIVTSSADKNIRIWGLDFGDCHKALFGHQDSILQVAFVPHNS
DGNGHHFFSSSKDRVIKYWDGDKFEQIQRLDGHHGEVWAMAVGHTGNFLVTAGHDKSIRV
WNETDEQIFLEEEREKEIEELYEKTLTTSLERDQDAEDQDGEVGAASKQTVETLMAGERI
AEALEIGIADLSLLKEWEDAKKSNPHAPAPQRNPIFLALGNITAEAYVMSVLSKIRASAL
HDALLVLPFSTVPMLFTFLDLFAQRSMNIPLTCRILFFMLKTHHRQIVASRTMRGMLDGI
RANLRAALKRQKDEMGFNIAALKVVGMQIQEKSVKDYVDENWDGGDDSRTVKKRAFVQVS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcatacttaaagtatgagcatagcaagtccttcggcattgtcgcatccaac
acatcaaacctcgtctgggcccccctaggcagagctggtagtggcaccggccaggcaatt
gtagctgcgaacgaggatgttttgtgctgggatatcaagaagggcgagcttttgagtagg
tggcgcgacgagagaaacaacgtacccgtcactgcgatcgcgcagagcaaggttgacacg
gatgtgttcgcggtcggatacgaggatggaagcattcggctgtgggatagcaagatcgcg
acggtgattgtcaacttcaacggacacaaatcagccatcacgacgctggcattcgataag
tcgggcgtgcgactggccagcggctccaaggacaccgacgtcattctctgggatctcgtg
gctgaagttggccagttcaagctgagggggcacaaggaccaaatcactgggttgcaattc
gtcgagccagaaggacaggttgaggatgaggaaaacatggcaatgctggacagcgatccg
tctgccgagggttacctccttaccacaggtaaggactctttgatcaagctctgggacttg
tcctcgaggcattgcatcgagacgcacatcgcacaaacgaatggcgagtgctgggctctg
ggactctcccccgactacagcgggtgcatcacggccggaaatgagggagaacttaaggtc
tggtttctggacacgacggcactcgccgcgttgaagggccaggttgacgcgccgcaagac
accaaattcttgcacgacagagggacactattccgccaacataaggacaaggccgtggag
gtggttttccacccgcgaagagactattttgcagtccatggcacggaaaaggcggtggag
gtgtggcgcatcagatccgaagccgaagtgaagaagtctttggccagaaagaggaggagg
agacgtgaaaaggctggcaaggaggcgaaggaggttggcgatggcgcggctgagggcgac
gagcaagctgatgacatctccaccgcggaggccagtgactttttcattcggtacgtcatc
gtccggacgggcggtaaggtgcggtcagtcgattgggctgtcaacggtggcagcaaggag
gttcacttgctggccggtacgacaaacaaccagctcgagctctacagcatacccacgaaa
gaaggttcgaagtcgaaaaaggaagacgtgcccgagtatacgcggtcgttggcagtagaa
ctcccgggacacaggacagacatccgcgccgtgtcgctcagctccgacgacaagatgctg
gccacggccgccaacggaagtctcaagatctggaacatcaagacgcaagcgtgtattcga
acgtttgagtgcggctatgccctgtgctgtgcattcctgcccggagacaaggtggttgtg
gtgggaaccaagacaggcgagctcgagctcttcgacgtcgcttccgcaagccttctcgac
agcgtctcagcgcacgatggcgctgtctggtcattacaagtgcacccggacggtcgatcc
gtggtgtccggcagtgcagacaaatcggccaagttctgggatttcaagattgtccaagag
gaggttctgggcaccactcgcacaacaccaaaactgaagctcgtccagtccaggaccctc
aaggtgtcagacgacatcctgtgtgtgaggtactcccctgatgccaagtacattgccgtc
tccctcctcgacaacaccgtcaaggtcttcttcaccgatagcctcaagctctatcttaat
ctgtacggccacaagctccccgtcctgagcatggacatatcctacgacagcaagctcatc
gtcacgagctccgccgacaagaacatcaggatatggggcctcgactttggcgactgccac
aaggccctcttcggtcaccaggactccatcctgcaggtggcattcgtcccgcacaactcg
gacggaaacggccaccacttcttcagcagttccaaggaccgtgtcatcaagtactgggat
ggcgacaaattcgagcagattcagcgcctcgacggccatcacggtgaggtctgggccatg
gccgtcggccacacagggaacttcctcgtcactgccggccacgacaagtccattcgcgtg
tggaacgagacagacgagcagatcttcctcgaggaggagcgggagaaggagatcgaggag
ctctacgaaaagacgctcaccacctcgctcgaacgcgaccaggacgctgaggaccaggac
ggcgaggttggcgccgcctcgaagcagactgtcgagaccctcatggccggcgagcgcatc
gccgaggccctcgagattggcatcgccgatctcagtctcctcaaggagtgggaggacgcc
aagaagtcgaacccgcacgcacccgcgccgcagcgcaaccccatcttcctcgccctcggc
aacattactgccgaggcgtacgttatgagcgtgctgagcaagatccgggcttcggcgctg
cacgatgcgctcctcgtgctgcctttctcgactgtgccaatgctctttaccttcctcgac
ctcttcgctcagcgatccatgaacattccgctgacgtgccgcatcctcttcttcatgctc
aaaacgcaccaccgccagatcgtcgccagccgtaccatgcgcggcatgctcgacggcatc
cgtgccaacctgcgcgctgcgctcaagcgccagaaggatgagatgggcttcaacatcgcc
gcgctcaaggtcgttggcatgcaaattcaagagaagagcgtcaaggactacgtcgatgag
aactgggatggcggtgacgacagccgaaccgtcaagaagcgagcctttgtacaggtttcg
tga
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