Colletotrichum higginsianum: CH63R_00480
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Entry
CH63R_00480 CDS
T08176
Name
(RefSeq) SNF2 super family protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_00480
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CH63R_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
UBA
UBA_RAD5A
P-loop_SecA
HDA2-3
PWI_ABCF3
CUE
UBA_8
HBS1_N
Motif
Other DBs
NCBI-GeneID:
28859562
NCBI-ProteinID:
XP_018163817
UniProt:
H1VAT4
LinkDB
All DBs
Position
1:complement(<1549858..>1552971)
Genome browser
AA seq
1037 aa
AA seq
DB search
MVIHLSLSSSPPVGSSALGTSPTRGPNRGDDADELASETIPCSPYQTQATQIVSRSSLAS
PTKSRLELSSSPSSRSVIEVPASSPFQPTGKSSTSAYFSRLVPPGTRFQPPPKSQPTPRS
LKRPSEEPVIVDSSDEENRRGSRENIARTSFKRHVSNFEYVSVDTLQKKIEEVADALGST
MPVQYCREALTACHNNVEDAINYLLDARHLKPKVNTFVGSTKPTSTAGGDRPTSLERKTS
RLGEPSKPKLLGQHVPSLPTPSRSTTPSPPKPKRRRLMQGRRPDRSPISSQQTHQVEPAL
DELADDKVDELIVIPDDKEDEDFDNDDEVNEAVKESLHDKALHAINSSPIEDLSAMTNIK
LDELKVIETKRPFDTIDEVQAVTVLKKSGARGRKPRVAIGETLVDAIMDFTRSVNAIDEV
VAECEKKANKVKQEISLWDLDVKGQKRSAQSQFAKDDLPLTPTSFRGQKLSEPPIPSQPK
LMEGHCTMRPFQLFGLNWMSLLYNSGYGCILADEMGLGKTCQVISLICHLVEAYGETAQG
ERPWPNLVVVPPSTFSNWMVEFQRFAPDLSVLAYQGPQAERREIAYEMLENPADYHVVLT
TYTQVGSEDDLEALRQLQPAAAIFDEGHKMKNPKTKIYKDLIRIKARWRMLLTGTPVQNN
LMEMLSLLNFIDPKQFSGRMDQLQYMFSQKVTIRDVNNGAFLYGERVSRARTILEPFILQ
RRKQQVLSDMPSKICNVAYCDLAPVQKELYEEYERLFKAGPVKKTSTGRQSDQNNSWMQL
RKAAIHPQLFRRYFTNAKVEQMAKILMREVPQSELQQPRIDHLVGELQNSSDFELHLWCR
DYACIRHLDVPEGSWMESGKVAKLLELIHQYRDNGDRVLVFSKFAKVVEILREVLHTGGI
RHCVLYGQTSVAERQDLIDDFNKDTDITAFLLTTGAGGTGINLTSANKIIIFDQSDNPQD
DIQAENRAHRLGQTRDVEVIRLLTSHTIEELIYKACQKKIELAEKVTGAVEDMEDKHAEE
NLEKEVRKMMADQLTPS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggttatccatttgagcctgagctcctcgccgccggtaggcagctcggcgttgggcacg
tcgcctaccagaggccccaatcgtggcgacgacgccgacgagctcgccagcgagacgatt
ccctgctcgccgtaccagacacaagctacgcagatagtcagccggagctccctcgcgtcc
ccgacaaaatcgcggctcgaattatcctcctctccctcctcgcgctcggttatcgaagtt
cctgcgtcgtcgcccttccagccgactgggaagtcgagcacctcggcctacttctcgcgc
ctcgtgcccccgggcacgcgcttccagccaccccccaaatcgcagccgacgccgaggtca
ctgaagagaccctccgaggaacccgtcattgtggattcttcggatgaagagaatcgccgc
ggctctcgtgagaacatcgcccggacgtctttcaagagacacgtctcaaacttcgagtac
gtctcagtggatacgttacaaaagaaaattgaagaggtcgccgacgctctcggcagtacg
atgccagtacaatactgcagagaggcactgaccgcgtgccacaataatgttgaagatgcg
atcaactacttgctagatgctcgtcatctgaagcccaaggtcaacacctttgtgggatct
accaagccaacaagcactgctggcggtgaccgaccaacgagcctggagcggaaaacgagc
cgattgggtgagcccagcaagccgaaactacttggacaacatgtgccgagcttgcctact
ccttcacgaagcaccacgccctcgccacctaagccgaagcgccggcgcctgatgcaaggt
cgtcgacccgatcgatctcccatttcatcgcaacagacccaccaagttgaaccggctttg
gacgagcttgcggacgacaaagtagatgagctgattgtcattcccgatgataaggaggac
gaggacttcgacaacgatgatgaagtcaacgaggcggtcaaggagagtctgcacgacaaa
gctctccatgccatcaatagcagccccatcgaggatctgtctgccatgacgaatatcaag
ctagacgagctcaaggtaattgagaccaagagacctttcgacacaatcgacgaggttcaa
gccgtgactgtcctgaaaaaatcaggcgctcgtggccgtaagcccagagttgcgatcgga
gagacattggttgacgccatcatggactttactcgcagcgtcaatgccatcgacgaggtt
gtagctgaatgcgagaagaaggccaacaaagtcaagcaagagattagcctttgggatctc
gacgtcaagggacagaagcgaagcgcccaaagccaatttgctaaggacgaccttcccctt
acgccgacaagcttccgcggacagaagttatctgagccgccaatcccctcccaaccgaaa
ttaatggaaggtcactgtaccatgcgtccgttccagcttttcggtctcaactggatgtct
cttctgtacaacagcggttacggatgcattctggctgatgagatgggcttgggcaagacg
tgccaggtgatttctctcatctgccatttagttgaggcttacggggaaactgcacaaggc
gagcgaccttggcccaacctcgtcgttgtaccaccgtccacattctctaactggatggtc
gagtttcaacgcttcgcccctgatctctcggttcttgcgtatcaaggtccccaggccgag
cgccgggaaatcgcttatgagatgctcgagaatcctgccgactaccatgttgtcttgacg
acatacacgcaggtcggttccgaggatgatctggaggccctacgacagctccagcccgct
gccgcaatctttgacgaaggacacaaaatgaagaaccccaagacgaagatctataaagat
ctcatcagaatcaaggctcgttggagaatgctactcaccggtactcccgtccaaaacaat
ttgatggagatgctctctctcttgaattttatcgatccgaagcaattcagcggccggatg
gatcagctccagtacatgttcagtcagaaggtcactatccgcgacgtcaacaatggcgcc
tttttgtacggagagcgcgtcagccgagccagaacgatcctcgagccttttattcttcaa
cgtcgcaagcagcaggtgctctctgacatgccatccaagatctgcaacgtggcatattgt
gatctggcacctgtgcagaaggagctgtatgaggagtacgagcgtctcttcaaggctggc
cccgtcaagaaaacaagcacaggacgccagagcgatcaaaacaacagctggatgcaactc
cggaaagccgccattcatccccagcttttccggcgttactttaccaacgcgaaggttgag
cagatggccaaaattctcatgagagaggtaccgcagtcagagctgcaacagcctcgcatc
gatcatctggtcggagagctgcaaaactcctccgactttgaactacatttatggtgtcgc
gactatgcctgcatcagacacctggatgtgcccgaaggctcgtggatggagagcggcaag
gtcgccaagcttctggaactcattcaccaatatcgtgacaacggcgaccgcgttttggtt
ttcagcaagttcgcaaaggttgtcgagatcctccgagaggtcctccacactggtggcatc
agacattgcgtcctgtacggccaaaccagcgttgcggagcgccaggacctgattgacgac
ttcaacaaagataccgacatcactgcatttctgctaacgactggcgccggtggtaccggt
atcaacctcacgtcagcgaacaagatcatcatctttgaccagtccgacaacccgcaagac
gacattcaggccgagaaccgcgctcatcgtctgggccaaacccgggacgtcgaggtcatc
cgtctcttgacctcgcacaccatcgaagagctcatctacaaggcgtgccaaaaaaagatt
gagctcgccgagaaggtgaccggtgcagtggaagacatggaggacaagcatgcggaagaa
aacctggagaaggaggttcgaaagatgatggcagatcagctaacgccctcatga
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