KEGG   Colletotrichum higginsianum: CH63R_00572
Entry
CH63R_00572       CDS       T08176                                 
Name
(RefSeq) RNA polymerase ii subunit 7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
chig  Colletotrichum higginsianum
Pathway
chig03020  RNA polymerase
chig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CH63R_00572
  09124 Replication and repair
   03420 Nucleotide excision repair
    CH63R_00572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chig03021]
    CH63R_00572
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_00572
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_00572
Transcription machinery [BR:chig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CH63R_00572
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CH63R_00572
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CH63R_00572
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 DUF7932
Other DBs
NCBI-GeneID: 28859654
NCBI-ProteinID: XP_018163909
UniProt: A0A1B7YTW1
LinkDB
Position
1:1855909..1856595
AA seq 165 aa
MERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGRILPGSGLAE
FTVGYRAVVWRPFKGETVDAVVYSVNHQGFFAQAGPLRLFVSAHLIPSEIKWDPNATPPQ
FTNNEDTIIEPGTHVRVKVIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq 498 nt   +upstreamnt  +downstreamnt
atggagcgcagggtcaccttgcatccctcctactttggtcggaacatgcacgagctggtg
acgagcaagctgttgaaggacgtggagggcacctgcgcgggaagctactacatcatttcc
atcatggataccttcgatatctctgaaggtcgcattcttcctggaagcggtctggccgag
tttaccgtcggctaccgagccgtcgtgtggcggcctttcaagggcgagacggttgatgct
gtggtctactcagtcaaccatcagggattttttgcccaggcgggacctctgcggttattc
gtgtcggctcatctgatcccgtctgagatcaagtgggatcccaacgcgacgccaccgcag
tttaccaataacgaggataccatcatcgagccgggaacacacgtgcgcgttaaggtgatt
ggcacgcgtacggaagtcggcgagatgtgggcgatcgggagcatcaaggaagactatctg
ggctgcctccaggattaa

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