Colletotrichum higginsianum: CH63R_00572
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Entry
CH63R_00572 CDS
T08176
Name
(RefSeq) RNA polymerase ii subunit 7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
chig
Colletotrichum higginsianum
Pathway
chig03020
RNA polymerase
chig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH63R_00572
09124 Replication and repair
03420 Nucleotide excision repair
CH63R_00572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_00572
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_00572
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_00572
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CH63R_00572
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CH63R_00572
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CH63R_00572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF7932
Motif
Other DBs
NCBI-GeneID:
28859654
NCBI-ProteinID:
XP_018163909
UniProt:
A0A1B7YTW1
LinkDB
All DBs
Position
1:1855909..1856595
Genome browser
AA seq
165 aa
AA seq
DB search
MERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGRILPGSGLAE
FTVGYRAVVWRPFKGETVDAVVYSVNHQGFFAQAGPLRLFVSAHLIPSEIKWDPNATPPQ
FTNNEDTIIEPGTHVRVKVIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaccttgcatccctcctactttggtcggaacatgcacgagctggtg
acgagcaagctgttgaaggacgtggagggcacctgcgcgggaagctactacatcatttcc
atcatggataccttcgatatctctgaaggtcgcattcttcctggaagcggtctggccgag
tttaccgtcggctaccgagccgtcgtgtggcggcctttcaagggcgagacggttgatgct
gtggtctactcagtcaaccatcagggattttttgcccaggcgggacctctgcggttattc
gtgtcggctcatctgatcccgtctgagatcaagtgggatcccaacgcgacgccaccgcag
tttaccaataacgaggataccatcatcgagccgggaacacacgtgcgcgttaaggtgatt
ggcacgcgtacggaagtcggcgagatgtgggcgatcgggagcatcaaggaagactatctg
ggctgcctccaggattaa
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integrated database retrieval system