KEGG   Colletotrichum higginsianum: CH63R_00610
Entry
CH63R_00610       CDS       T08176                                 
Name
(RefSeq) WD repeat domain-containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_00610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_00610
Spliceosome [BR:chig03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CH63R_00610
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 PRP4 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_RIG_1st WDR54 Beta-prop_DCAF4 Nbas_N WD40_like Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 28859692
NCBI-ProteinID: XP_018163947
UniProt: H1W5V4
LinkDB
Position
1:1971881..1973428
AA seq 515 aa
MMHPSRQAYVEEAMDEDRGIALEDIPTDHDYEIPSAFSGAAPEKASAVLAQMERKKLAAS
IAVPTDDNRVRAKLREMGEPITFFGEGKPERRDRLRNLLAIQHEMAGLESGDIEMEDADE
DGEEQDEEFYTPGGQALLQARIDITKYSLPRAKRRIQFQKAEASIPLRTHVKFRKQIKDK
LEAFELQGSQTAGDRHISMTRLSPNGEIVAVGNWGGGLKLIEVPSLEAKLNLRGHTQKIS
GITWRPGSTLTESNVSPDAVNLASGGAEGSVHLWSLNQDTPLSTLTGHGGRVSRVEFHPS
GRYIASASDDTTWRLWDVETTAELLLQEGHSRGVYSVSFNADGSLLASAGLDSIGRIWDL
RSGRTVMILDEHIQPIYALDWGSEGHRVLSGSADGWIKCWDIRKVQRTANLGAHAKAVSD
IRWFRGLDDPIDGNPPGTDEKGAQQPKKAGTFFVSSGFDAKIKIFSADNWGVIQTLSGHS
GPVASVDVSRDGKWIVSGGHDRTVKLWGRNDGEGL
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgatgcacccgtcgcggcaagcctatgttgaggaggcgatggacgaggatcgaggcatt
gcgctggaggatattcccacggatcatgactacgagatcccttccgcattctctggcgcc
gcgcccgaaaaagcctccgccgtcctggcgcagatggagagaaagaagttggcagcaagc
attgccgtgcctacagacgacaaccgagtgcgcgcgaagctcagagagatgggcgagccc
atcacattcttcggcgaaggcaagccagaacgcagagaccgtcttcgcaaccttcttgcc
attcaacacgagatggccggtctcgaaagcggcgacatagaaatggaagacgcagacgag
gacggagaagagcaggacgaggaattttacacaccgggcggccaggcactgctgcaggcg
cgcatcgacatcacgaaatattcactcccgagagcaaaacggcggatccagttccagaag
gccgaagcctcgattcctttgcgcacacacgtcaagttccggaaacagatcaaggacaag
ctggaagcctttgagcttcaaggtagtcagacagccggcgataggcacatcagcatgacg
agactgtcgccgaacggagagatcgttgcggtgggcaactggggtggaggcctaaagctt
attgaggttcccagtttggaggcaaagttgaacctcaggggacacacccagaaaatcagc
ggtattacatggcgtcctggttctacgctgaccgaaagcaacgtgtctccggacgcagtg
aaccttgcatctggaggagctgaaggctcggtgcacctgtggtcgttgaatcaggatact
cccctttcaaccctcactggccatggcggcagagtgtcccgcgttgagtttcatccttcc
ggccgttatattgcgtcggcttcagatgataccacatggaggctctgggatgtcgagacg
actgctgagctgctgcttcaggaaggtcactccagaggcgtttactctgtcagtttcaac
gccgatgggtccttgttggcaagcgctggtctcgacagcattggccgtatttgggatctg
cgatccggacgaactgtgatgatccttgatgagcatatccaacctatttacgcgctcgac
tggggttccgagggccacagggtactgtcaggatcggcagacggctggatcaagtgttgg
gacattcgcaaggtccagagaacagcaaacttgggagcgcacgcgaaagctgtttccgac
atacggtggttcaggggattggacgaccccatcgatgggaacccccctgggacagatgag
aaaggcgcgcaacaacccaagaaggccggtacattctttgtgtccagcggctttgacgcc
aagatcaagatcttctcggccgacaattggggcgtcattcagacgctgagcggacattct
gggcctgttgccagtgtcgatgtgagtagagacggaaaatggatcgtgagtggaggacac
gatcggacggttaagctttggggccgcaacgacggtgagggtctttga

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