Colletotrichum higginsianum: CH63R_00632
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Entry
CH63R_00632 CDS
T08176
Name
(RefSeq) RecQ family ATP-dependent DNA helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03440
Homologous recombination
chig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH63R_00632
03460 Fanconi anemia pathway
CH63R_00632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_00632
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_00632
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH63R_00632
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CH63R_00632
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CH63R_00632
Bloom's syndrome complex (BTR)
CH63R_00632
FA (Fanconi anemia) pathway
CH63R_00632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRDC
SecA_DEAD
MC4
ALMT
Motif
Other DBs
NCBI-GeneID:
28859714
NCBI-ProteinID:
XP_018163969
UniProt:
A0A1B7YU26
LinkDB
All DBs
Position
1:2039113..2044304
Genome browser
AA seq
1696 aa
AA seq
DB search
MTRNNLGDQVSWLLSNVAISKPTDLFFPPARDPLGPASSQSQSRFSSSNSQQGLPSHSIS
QPIPDFSPVGTALHAFNAVEQPQDTRVATAGSSASMARLTSSARHRKPSLAMKQQQLLTP
SSTTSGGRFQQAYTAKLQQEDAQLGRISRNLPSSSQEERRKTAPAGTPDFLDDDDDEILD
LTGNDMIMSSDSMAFDDEVAAWNDVHAPIPDPLVKRGQKRKSTEMSKTELDSDSNSDEFP
DIYKTLGTPAPKGSRSVKGPKTIPSSIRRATTDSGVIEERTITQTISRTQRTYKMTDEGN
GSGTPRRIPMALGAQQALGRTPSKALQIPSSPESSSKIKPLNLQASTNNKQRSRPRVIQD
SDDDEFGDEDIDDELLATPSRRTGVLLTARSRPSSIPLDDLELSDGLVAPDTPSRSDSSV
LQAANHRTPAEAHQMKPLPRQDMNKPLSQQSASSQGQKPAILKFILSNPDSLEAKEKMIQ
DQLEQNSKEYARVLREGSRDDRAQVKSAKELLLKQQAGLKEVSDLLRSHAMLMDERESLA
MHIADAYDEGRDTEEDENRLDGLADKVGDLEQSIGQLLPGVGIDDESFIEDYRRSKSIVM
STQPGNKDLSRTSRDGQATTEMDNQVIHQTQFPGSSRLTDPRDCSPPPFLRGRPEPSRSA
SVKQSRRDEFDDDFFDDIEDDFDPFHPAAPQVLRPTPNRRTPLKKTRPRAQEMSSDYGDD
TDADMLALAQDFELRQSSSAETTRGRGVLAATSGNASQLSRAIEPLKKREPAKAKLSIPP
ELMKHSWSADVRKALKDRFRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAI
ISSGKTRGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKERSPEL
YIQLLYVTPEMLNNSQNFMRALTNLYVNKRLARIVIDEAHCVSQWGHDFRPDYKALGKLR
HQFPTVPIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKEKELIHKIA
DLIMSKYDGQCGIIYTLSRKTSEQVAEKLRSQYGVKANHYHAQMTPEDRIRVQREWQADK
IHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFGYQDVA
TLKKMIADGEGSEVQKERQRIMLNRVTAFCDNRENCRRVEILRYFGEVFNSDDCEKTCDN
CRAGAVFEQHDFSELANAAIRTIELHERLTINQCSEILMGKKYQRTIDPHPDDPHGIAKG
MKKHEIERILDRLTAEEALEEENVVNKRAGIAIQYLIVGRNAHLFTNGRRKLLLSVQVSD
RNREPLAPKPKKRTKRSKKDDEQDLDEEPSRRLPPSTNVSSPAQARTTLNARKKGKALAV
IVDSDEEDEMVRHEAEDQDLSTHSNGYAKDGFVMSDNDSDDGFEPLPKSRKRGNTSRDIG
PRIEGDGRLVGLDELHQDVVHNFVEEAKQLEESLRNAQGLRKPLFSEKSFQEMAIRWTTT
LPQMCQIVGIEPEKVDKFGNKFIPLIKRFQSNYRAMIGTEDGDEDMSAGEQDIVDLISSD
ENEDDEEGEEEEESSKYFSSGPPPLVPAVQEWNERMRELDTAPPSRTSSSNSTRGRGAGA
RGGRRSGSRKSSSTWAGFKKQGGGVAKKKATGGASRRNGGGATVAGSKNSSMTSYVSRGG
KRGGRGGGGGIGLMPH
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaacaacctcggggatcaagtctcctggctgctgagtaacgtcgcgatatcc
aaacccaccgatctcttcttcccaccagctcgcgatccccttggccccgcatcgtcgcag
tcgcagagccgcttcagcagctcaaactctcaacaagggcttccaagccattcgatttct
caaccaatacccgatttttcgcctgtaggaaccgcacttcatgccttcaacgcggtggaa
cagccacaagatactagggtggcaacagcaggaagctctgcctcaatggcgaggctgacc
tcgtctgcgaggcataggaagccctcgctggcaatgaagcagcagcagttgctgacacca
tcctcgacgacaagtggtgggcggtttcagcaagcttatacggcgaagctgcagcaagaa
gacgcacaactagggcgaatcagccgaaaccttccgtcatcttctcaagaagaaagacga
aaaactgcacccgcaggtacaccggatttcctcgatgacgatgacgacgaaatcctcgat
ttgactggcaatgatatgatcatgtcatcagactctatggcatttgacgacgaagttgca
gcatggaacgacgtgcatgctccaatcccagacccgttggtcaaacgtggccagaagaga
aaaagcacagagatgagcaagacagagttggactcagactccaactcggatgaatttccg
gacatctacaagacactgggaacaccggcccccaagggtagtcgttcagtcaagggacca
aagactataccgtcaagtattcgtcgggcgactactgacagcggcgttatcgaggaacgg
accatcacgcagacaatcagccggacgcagcgcacctacaagatgacggacgaagggaac
gggagcgggaccccgcgccgcatacctatggcattgggagcccagcaggcccttggaagg
actccgagcaaagcgctacaaataccatcaagccccgaatcgagcagcaaaatcaagcca
ctgaatctccaagcgagcacgaacaacaagcaacgtagcagacctcgggttatccaagat
tccgacgacgacgagtttggtgatgaagatattgatgatgagcttcttgctacgccgagc
agacgtaccggagtactgttgacagcaagatcaagaccgtcgtcaattcctttggatgat
ttggagttgtctgacggacttgtggcccccgatactccctccaggtctgactcatcggtg
ttgcaagctgcaaatcatcgcacaccagccgaggcgcatcagatgaaacccctaccccga
caggacatgaacaagccactgtcccaacaaagcgcctcatcccaggggcagaaaccagcg
atacttaagttcatcttgagcaacccagactctctggaggccaaggagaaaatgattcag
gatcagctcgagcagaactcaaaggagtatgcaagagttctacgcgagggctcaagagat
gaccgcgcccaagtcaagagcgcaaaggagttgctgttgaagcaacaagctggcttgaag
gaagtttccgaccttctcaggtctcacgccatgctcatggatgagagagagtctcttgca
atgcatatcgccgatgcttacgatgaaggccgcgacactgaagaggacgagaatcgttta
gatggcctcgcggacaaagttggggacttggaacaatccattggccagcttcttcctggt
gttggcatagacgacgaatcttttatcgaagattatcgtagatcaaagtcgatcgtcatg
agtactcagcccggcaacaaagatctgtcccggacatcaagggatgggcaagcgaccaca
gagatggacaatcaagttatccatcagacgcagtttcctgggtcgtccagactcaccgat
cccagggattgttcgcccccgccgtttctccgaggcagacccgagccgtcgaggagcgca
agtgtcaagcagtcccggcgggatgaattcgatgacgacttttttgacgatattgaagat
gattttgacccatttcatcctgctgcgccacaagtgctcagaccgacgccgaatcgccga
actcctcttaagaaaacccgcccgcgtgctcaagagatgtcgagcgattatggcgatgat
accgacgcagacatgcttgcgctcgctcaggacttcgaacttcgccaatcttcatccgcc
gaaaccactaggggcaggggtgtgcttgctgcaacctcgggcaacgctagccagctctca
agggctatcgaacccttgaagaaaagggagccggcaaaagcgaagctgtcaatccctccc
gagctgatgaaacattcatggtctgcagacgtgcggaaggccctgaaagacagattcagg
atgagaggatttcgctcgaaccagcttgaggcgatcaacgccacgctcgccggcaaggac
gccttcgtgctaatgccgacaggcggaggtaaatctctttgctaccaactgccagctata
atcagcagcgggaagacgaggggaatcacaattgtcgtatcccctttgctcagtctcatg
caagatcaggtggaccacatgtcagctctcaacatccaggcggtctctctcaacggcgaa
acgaatgcgcagaagcggaaccagatattctcttcgttcaaagaaaggagcccggaactc
tatatccagctcctgtacgttacgccagaaatgttgaacaacagtcagaatttcatgagg
gccttgacgaatctatatgttaataagaggctcgcacggattgtcatcgacgaagctcat
tgcgtcagtcaatggggtcacgatttccgcccagactacaaggctctcggcaaactccgt
catcaattccctacagttccaatcattgcacttacggcgacggcgacccagaacgtcatt
gttgacatcaagcacaatctgggcatggacagctgccaagtgttttcccagagcttcaac
cggccaaacctcacgtacgaggttcgcaggaaagaaaaggagctgatccacaagatcgct
gatctgattatgtccaagtatgacggccagtgtggaatcatctatactctgtcgagaaag
acttctgagcaggtggccgaaaaactccgatcccaatacggtgtgaaagcaaaccattat
catgcgcaaatgacgcctgaagacagaatcagagtgcagcgagaatggcaagcagacaag
attcatgtcgtcgtagcaacgattgcttttggcatgggcattgacaaacctgacgtacga
tttgtcattcaccactcggtccccaagagtctggaaggctactaccaagaaacaggacgt
gccggaagagatggcaacccctcggactgcattctgttctttggataccaggatgtcgcc
accttgaagaagatgattgcagatggcgagggtagcgaggtgcaaaaagaacgacaaagg
attatgctcaacagggtcactgctttctgcgacaaccgggagaattgccgtcgtgttgaa
attcttcgctacttcggagaggtcttcaactcggatgactgcgagaagacgtgcgacaac
tgcagagcgggggccgtatttgaacagcatgacttttctgaacttgccaacgccgccatt
cggaccattgagcttcacgaacgcctgactataaatcagtgcagtgagattttgatggga
aagaagtaccaaaggacgattgatccccatcctgacgatccccacggcatcgccaagggg
atgaagaagcacgagatcgagcgtatcctcgacaggctcacagccgaagaggctcttgaa
gaggagaacgtagtaaacaagagggccggcatcgcgatccaatacctcattgttggccgc
aatgctcatttgttcaccaacgggcgccgcaaactgctattgtcggtccaggtctctgat
aggaatagagaaccgttggcaccaaagccgaaaaagcggactaaaagaagcaagaaggac
gacgagcaggatctagacgaggagccatcaagacgtctgccgccttcgacgaatgtttcc
tcgcccgcccaagcccgaacaactctcaacgcgaggaagaagggcaaggctctagcggtc
atcgttgattctgacgaagaagatgagatggtgcgacatgaggccgaagaccaggatctt
tctacgcactcaaacggctacgccaaagacggcttcgtcatgtctgacaacgattccgac
gacggattcgagccactgcccaagtctcgcaagcgaggaaatacctctagggatattggg
cctcgtatcgaaggcgacggacgtttggtcggccttgatgaactgcatcaagacgtcgtg
cacaactttgtcgaggaggcaaagcaacttgaagagtctttgcgcaacgcgcagggtctc
cggaaacctctcttttccgagaagagctttcaggaaatggccattcggtggacaacgact
ctacctcagatgtgccagattgtagggatcgagccagagaaagtggacaagttcggaaac
aagttcatccctctgatcaagcgcttccaaagcaactacagggccatgataggcacagag
gatggggacgaagacatgagtgcgggcgagcaggacatagtagacctgatcagctccgac
gagaacgaggacgatgaggaaggggaagaggaagaggaatcctcgaagtattttagtagc
ggtccgcctcccctcgtgcctgccgtccaggagtggaacgagcgaatgagggaacttgac
acagcccccccatctcgaacctcatcgtcgaactccacacgaggtcgcggcgcaggtgcc
cggggcggccgaagatcgggctctcgcaaaagctccagcacgtgggcgggcttcaagaag
caagggggtggcgtagccaaaaagaaggcaactggcggtgcaagcaggaggaacggcggc
ggtgcgactgttgcaggctcgaagaacagctctatgacgagctatgtctccagaggcggg
aagagaggcggccggggaggtggcggcggcattggactgatgccgcattga
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