Colletotrichum higginsianum: CH63R_00652
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Entry
CH63R_00652 CDS
T08176
Name
(RefSeq) DEAD/DEAH box helicase
KO
K03257
translation initiation factor 4A
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_00652
03012 Translation factors [BR:
chig03012
]
CH63R_00652
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_00652
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CH63R_00652
mRNA cycle factors
Stress granule specific factors
CH63R_00652
Translation factors [BR:
chig03012
]
Eukaryotic type
Initiation factors
eIF-4
CH63R_00652
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CH63R_00652
Exosomal proteins of bladder cancer cells
CH63R_00652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
CMS1
UvrD-helicase
Flavi_DEAD
IL17R_D_N
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
28859734
NCBI-ProteinID:
XP_018163989
UniProt:
H1VF71
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All DBs
Position
1:2119401..2120966
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AA seq
396 aa
AA seq
DB search
MADKGLEDVPEGQIESNYDETVDSFDDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKG
HDVIAQAQSGTGKTATFSISVLQKIDTNVKACQALILAPTRELAQQIQKVVVAIGDFMNI
ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR
GFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFY
IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ
RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG
VAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagggtcttgaggatgtgcctgagggccagatcgagtcgaactacgatgag
accgtcgactcttttgatgacatgaacctgaagtcggagctcctccgtggtgtctacgcc
tacggtttcgagcgtccctccgccatccagcagcgtgccatcatgcccgtcatcaagggc
cacgatgtcattgctcaggctcagtccggtactggcaagaccgccacgttctccatctct
gtcctccagaagatcgacaccaacgtcaaggcctgccaggctctgatcctcgcccccacc
cgtgagcttgctcagcagattcagaaggtcgtcgtcgccatcggtgacttcatgaacatt
gagtgccacgcctgtatcggcggcaccagcgtccgcgacgacatgaaggccctgcaagac
ggtccccaggttgttgtcggtacccctggtcgtgttcacgacatgatccagcgccgcttc
ctcaagaccgacagcatgaagatgttcgttcttgacgaggccgacgagatgctttctcgc
ggtttcaccgagcagatctacgacatcttccagctgctcccccagagcacccaggtcgtc
cttctgtccgccaccatgccccaggacgtccttgaggtcaccaccaagttcatgcgcgac
cctgtccgcattctcgtcaagaaggacgagcttaccctcgagggtatcaagcagttctac
atcgccgttgagaaggaagagtggaagctcgacactctctccgacctgtacgagactgtc
accatcactcaggccgttatcttctgcaacacccgcagaaaggttgactggctcaccgac
aagctcactgcccgtgacttcactgtctccgccatgcacggtgacatggaccaggctcag
cgtgacctgattatgaaggagttccgttccggatcttcccgtgtcctgatcgccactgac
ctcctggcccgtggtatcgacgtccagcaggtctctctggtcatcaactacgaccttccc
gccaaccgcgagaactacatccaccgtatcggtcgtggtggccgtttcggtcgtaagggt
gttgccatcaacttcgttaccgccgaggatgtccgcatgatgagagagattgagcagttc
tacagcacccagatcgaggagatgcccatgaacgttgccgaccttatctaa
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