Colletotrichum higginsianum: CH63R_00791
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Entry
CH63R_00791 CDS
T08176
Name
(RefSeq) Nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_00791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_00791
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_00791
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
Nup88
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
28859873
NCBI-ProteinID:
XP_018164128
UniProt:
A0A1B7YU99
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Position
1:complement(2588297..2590637)
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AA seq
760 aa
AA seq
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MSFSFGNTNATPTSNSGSTPAASAPASGGLFGGASTGTPSFSFGNLGSSNTPAAGSSSGT
PASSGSLFGQNAGQKPAGGLFGGGTSAASTGTPTSTGGGLFGAKPAAGASSTPAASGGPF
GSNTGSSTPSTSAPPSGGLFGAATASSGTPAASSGGLFGGDKAAAKPAVSLFGGGNTGGS
STPGGLFGQNASSSSATTTAPASSGGLFGGMNKPASSTPATIGASATQATPAKPAFSLGG
STTPAGAPPAGANKPATGGLFGGAAPSGSAAPSPFGTAAAKPAENNSAGGLFGGAGQSKA
ASTAQPASGGSLFGGQAQQQPAASGGLFGDQKPATTAAPSTGGLFGGQAAATTSSAQPAS
TTSTAPAAGASSLFGGAKPATPTTSAPAASSTGGLFGGNTSSTPAAATTQAGSSAGGLFG
KPATTASAAPAATAAPSSLFGGQTSAAPANKPASGGLFGGGPAASTSQPASTTTSTAPAT
TSAATQPTTAPSTTASAGGLFGAKPSTPAAGASTQNGTAPATTSAPTGNSNTLAASTTGP
TSQLPRLKNKSMDDIITRWASDLSKYQKDFKHYANQVADWDLGLVDNGEKIQKLYLNTFE
AEKASHEIERQLQAVESQQDELEDWLNRYESDVKEMFSRQMGQGETLAGPDQERERTYKL
AEKLTQNLDEKSRDLSKMVKEINDISGTLSKGTKPEDPLSQIVRVLNGHLSQLQWIDTNA
ASLQAKVSAAQKANNNLGSQYGAPETDAAESFYRSYMGRR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcagcttcggaaacacgaacgccacgcccacgtcgaacagcggctcgacccct
gcggcttctgcaccggcatctggaggtctcttcggcggcgcctctaccggcactcccagc
ttttctttcggtaacctgggaagtagcaatacacccgccgccgggtcgagcagtggcacg
ccggcttccagcggatcactctttggacagaacgctggccagaaaccagcaggcgggctc
tttggcggcggcacttcagccgcctcaactggaacacccacatcgactggcggtggtctc
ttcggggccaagcctgcggctggcgcatcatcgactccggctgcttctggcggtccattc
ggttcaaacaccggctcctctactcccagcacatctgcacccccctcaggaggtctcttt
ggcgctgctacagcctcgagcggcacccctgctgcatcttctggtgggctgtttggagga
gacaaggctgcggcaaagccggcagtgagcttgtttggcggcggaaacactggaggctct
tctacacctggcggtttgttcggtcagaatgcatcgtcaagctcagcgacaacaactgct
cctgcttccagcgggggtttgttcggtggcatgaacaagcctgcatcaagcacgccagct
actattggtgcttccgcaactcaggctacacctgcaaagcccgccttctcactcggagga
tcaacaacgccggctggagctcctcctgcgggcgcgaacaagcctgcgacaggtggactt
ttcggtggtgccgcaccatctggctcggcagccccgtctccctttggtactgcggcggcc
aagccggcggagaacaacagcgcaggcggtctttttggtggcgctggacagtccaaggct
gcttccacagcccagccggccagtgggggctctctctttggcggccaggcgcagcaacaa
cctgccgctagtggtggtctcttcggagaccagaagccggccacaaccgcggcacccagc
actggaggtctcttcggtggccaggctgctgctaccacttcctcagcccagcctgcttcg
acaacttccacagctcccgcagcaggcgcctcttctctcttcggtggcgccaagcctgct
acccctaccacctcggctccggctgcgtcatctaccggcggcttattcggcggtaacaca
tcttcgacgccggctgcggcgacgacacaagctggctcttctgcagggggcctttttgga
aagcctgctactaccgcatctgcggcccccgctgccacggcggctccttcgtcgctcttc
ggcggacagacatccgcggctcctgccaacaagcctgcgagcggcggactcttcggaggc
ggcccggcggcgagcacctctcaaccggcatcaaccactacgtcgactgcgccagcgact
acgtctgccgcaactcaaccaacaacagcccccagcactactgcatcggccggtggtctc
tttggtgccaagccatcaacaccagctgctggagcatcaacccagaatggcacggcaccc
gccaccacatccgccccgactggcaactcaaataccttggcagcctccacaaccggccct
acttctcagcttccccgtctgaagaacaagtctatggacgacatcattacccgatgggcc
tcggacttgtccaagtatcagaaggactttaagcattatgctaatcaggttgctgactgg
gacttgggcctggtcgacaatggcgagaagattcaaaagctttacctaaacacttttgaa
gccgaaaaggcaagccacgagattgagcggcagctccaggcagtggagagtcagcaggac
gagctcgaggactggctcaatcgctacgaatccgatgttaaggagatgttctcccgccag
atgggacagggcgagaccctggccggacccgaccaggagcgcgagcgcacatacaagctc
gccgagaagttgacgcagaatctcgatgagaagagcagagacctgtccaagatggtcaag
gagatcaacgacatctctggtactctgagcaagggcaccaaacccgaggatcccctgagc
cagatcgtccgtgttcttaacggccacctctcgcaactccagtggatcgacaccaacgcc
gcgtccctacaggccaaggtatccgccgctcagaaggcgaacaacaaccttggcagccag
tatggagcgccagagacagatgcggcggagagcttctaccgatcttacatgggtcggcga
tga
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