Colletotrichum higginsianum: CH63R_00840
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Entry
CH63R_00840 CDS
T08176
Name
(RefSeq) RNA polymerase I specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_00840
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CH63R_00840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
IBN_N
FdhE_N
Motif
Other DBs
NCBI-GeneID:
28859922
NCBI-ProteinID:
XP_018164177
UniProt:
H1VYJ2
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Position
1:complement(<2738065..>2740134)
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AA seq
689 aa
AA seq
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MRPFTPISRHRSGPPPRTATPIKSILRQTSTVLGRRKADEIDFDAADPPSSPTKRRKVLI
NEMNNRVFEFGNRSMDEVNSEVRKALEEHLMGEDEDYDMLKEIFANDKQRYLPPVAGEDE
DTLKPQELKGYVLALTSCVPLLKNKACNGLVRTVLQVSWLGRDEDFFKVYIQFLAALVSA
QGSYLTHVLSMIVEKFSQSRLSEWTVADFPPVSRATMRERLHTGLQYILQMFPAATPVLR
NLIDTKFPFDDDPKRMFVAYVNNLLRLKEYAGELDLEIVDVLLSRLVKIDVQMQTDLDDL
DDDLTASVAYALGQSLGNDSWEGDEDASDEDSDDESVDSDDSDFDDKEEKIRVVKGNVEK
LDAILDTLFEHYTPLFENPDSDQAWERYALLVQSFGKIVLPTYKSRHTQFLLFHFGQMSA
RLRDTFVGSLMHIFGSQNRPSFVRQAAATYLAGFMARGAHVPSDLVRTVFALLLKQMQIY
RLKHDPDARGPDLRRHQIYYAQVQAALYMFCFRWRDLIVSTPEFVDRDDPASYLGHELEW
MQGMREELSASVYCKMNPLKICAPAIVEEFATLAHKLGLMYIFPRVEENKRIRLSQFVSD
TYGMGGALRDTGSGAQDEEAYQLDPYFPFDPYQLPVSKRWVQDDYVHYQAVPGLNMTADD
DSDEDEEEHIPETDVEEDTATASEDEDDD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctttacccccatttccagacaccggtctggtccgccaccgagaacggcgacg
cccatcaaaagcattctgcggcaaacgtctacagtccttggccgaaggaaagccgacgaa
atcgactttgatgcagccgacccgccttccagcccgaccaagaggcggaaggtcctcatt
aacgaaatgaacaaccgcgtcttcgaattcggcaaccggtcgatggacgaggtgaactcg
gaagtccggaaagcgctagaggagcatctgatgggggaggacgaggattacgacatgctc
aaggagatcttcgctaatgacaagcagcggtacctgccgcccgtcgccggggaggatgaa
gacaccctcaaaccccaggagcttaagggctacgtgctggcgctgaccagctgcgtcccg
ctgctgaagaacaaggcctgcaatggtcttgtgaggacggtgctacaggtctcatggctg
ggtcgagacgaggatttcttcaaagtgtacatccagttcctggccgccctggtcagcgcc
cagggctcctacctgacgcacgtgctgtccatgattgtcgagaagttctcccagtccaga
ctttcggaatggaccgttgccgactttcctcccgtcagtcgtgcgacgatgcgtgagcgg
ctacacaccggcctgcagtacatccttcaaatgttccccgccgcgacgcccgttctccgc
aacctgatcgacaccaagttcccgttcgacgacgaccctaagaggatgtttgtcgcttac
gttaacaacctcctgaggctgaaggaatacgccggggagttggatctcgagatcgtggac
gtgctgctgtcgcggctggtcaagatcgacgtgcagatgcagacggacctcgacgacctc
gacgatgacctcacggcgtcagttgcgtacgcgcttggacagtcgctaggcaacgactct
tgggaaggcgacgaagacgcttcggacgaggacagcgatgacgagtcggtcgacagcgac
gattcggatttcgacgacaaggaggagaagattcgggttgtcaagggcaacgttgaaaag
ctggacgccatcctcgacaccctgttcgaacactatactcctctattcgagaaccccgac
tcggaccaggcgtgggaacggtacgcgttgctcgtgcagtcttttggaaagattgtgctg
ccgacatacaagtcccgtcatacccaattcctactcttccactttggccagatgtcggcg
cggctgcgagacacctttgtcggcagtctgatgcacatattcggctcgcaaaaccgacca
agctttgtccggcaggcggcggcgacgtacctggccgggttcatggcgagaggcgcccac
gtgccgtccgatctggtgcgcacagttttcgcccttttgctcaagcagatgcagatctac
cgcctcaagcacgaccccgacgcccgtggaccggatctgagacggcaccagatttactac
gcgcaagtgcaggctgccctttacatgttttgcttccggtggcgcgacctgattgtatcc
acgcccgagtttgtcgaccgagacgaccccgcgtcctacctgggccacgagctggagtgg
atgcaagggatgagggaagagctctcggcgagcgtctactgcaagatgaaccctctcaag
atctgcgcaccggcaattgtcgaagagtttgcgacactggcgcacaagctcggactcatg
tatatcttcccccgcgtggaggagaacaagcggatcagactgtcacagttcgtgtcggac
acatacggcatgggcggcgcgctcagagatacgggctccggagcacaggacgaggaggcg
taccagctcgacccctacttcccctttgacccctatcagctgcccgtcagcaagcggtgg
gtgcaagacgactacgtgcactaccaggctgttccgggtctcaacatgacggccgacgac
gacagcgacgaggacgaggaggaacacataccggagacggatgtcgaggaagatacggcc
accgccagcgaagacgaggacgacgactga
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