Colletotrichum higginsianum: CH63R_00855
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Entry
CH63R_00855 CDS
T08176
Name
(RefSeq) Apurinic endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH63R_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_00855
Enzymes [BR:
chig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CH63R_00855
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CH63R_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2124
Motif
Other DBs
NCBI-GeneID:
28859937
NCBI-ProteinID:
XP_018164192
UniProt:
A0A1B7YUE7
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Position
1:complement(2774777..2776285)
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AA seq
463 aa
AA seq
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MPPRTSARRKAQAVVETKVEETTTTATRTNGTSTSIAATQTKRTAAKKPVAKRKAASDEE
HESCGSCAEKDEEKPAKKRKTAAKGKAKKEDDMPLADRTAVSSLKKAMYIGAHVSGAGGV
QNSIQNALNIGANAFALFLKSQRKWESPPLAADAKTQFVSLAKDNGYDAAAHVLPHGSYL
VNLAQADAAKAKQAYTSFIDDLQRCEQLGIKLYNFHPGNTGGASREEACGRIAAQLNTAH
KATKNVITVLENMAGAGNVIGTKFEDLKHIIDKVEDKERVGVCIDTCHAFAAGYDLRTPD
KFHETMKEFDEIVGNKYLKAFHLNDSKAPFASHRDLHANIGTGFLGLRAFHTLVNHEPFQ
DLPMVLETPIDRKDDNGKTVEDKQVWADEIKLLERLIGMDADGEEFKELEEELRGKGEGE
RSKIQDQVDRKAEKDAKKGTRGAKKGAAVKGRKKKAETDDESD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgcacgtctgcccgcagaaaagcgcaagctgttgtcgagaccaaggtcgaa
gagacgacgacaacggccacgaggacgaacggaacgagcacatctatcgctgccactcag
acaaagagaacagctgctaagaaaccagtcgccaagcgcaaggccgcgtcggacgaagag
cacgagagctgcggcagctgcgccgagaaggacgaggagaagcccgccaagaagaggaag
accgcggccaagggcaaggcgaagaaggaggacgatatgcctctggcggatcggacggca
gtttcttcgttgaagaaggcgatgtacattggtgctcatgtgagcggtgctggtggtgtg
caaaactctatccaaaacgccctcaacattggcgccaatgccttcgcgctgttcctcaag
tcacagcggaagtgggagagccccccgctggcagcggatgcgaagacgcagttcgtctct
ctggcaaaggacaacggctacgacgctgccgcccacgtcctcccccacggttcctacctt
gtcaatctcgcccaggcagatgccgccaaggcgaaacaggcgtacacgagcttcattgat
gacctccagcggtgcgagcagcttgggatcaagctgtataacttccacccggggaacacg
ggaggcgcctcgcgcgaggaggcgtgcgggcgcatcgcggcgcagctgaacacggcgcac
aaagcgacgaaaaacgtcatcacggtcctggagaacatggctggcgcgggaaatgtcatt
ggcaccaagttcgaggacttgaagcacatcatcgacaaggtcgaggacaaggagcgggtc
ggcgtgtgcatcgacacctgccacgccttcgcggcgggttacgacctgaggacgcccgac
aagttccacgagacgatgaaggagtttgacgagattgtcggaaacaagtacctcaaggca
ttccatctcaacgacagcaaggcccccttcgcctcgcatcgcgacctgcacgccaacatc
ggcacgggctttctcggcctgcgcgcctttcacacgctcgtcaaccacgagcccttccag
gacctccccatggtcctcgagacgcccatcgaccgcaaggacgacaacggcaagacggtc
gaggacaagcaggtgtgggcggacgagatcaagctgctggagcggctaattggcatggat
gccgacggcgaagagttcaaggagctcgaggaggagctgcggggcaagggggagggcgag
aggagcaagatccaggaccaggtcgaccgcaaggcggagaaggacgcgaagaaggggact
aggggggcgaagaagggtgcggcggtgaaagggaggaagaagaaggccgagacggatgat
gagagtgattaa
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