KEGG   Colletotrichum higginsianum: CH63R_00896
Entry
CH63R_00896       CDS       T08176                                 
Name
(RefSeq) U2 snRNP auxilliary factor
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_00896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_00896
Spliceosome [BR:chig03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CH63R_00896
 Complex B
    CH63R_00896
SSDB
Motif
Pfam: RRM_1 RRM_occluded TcpA RRM_Rrp7
Other DBs
NCBI-GeneID: 28859978
NCBI-ProteinID: XP_018164233
UniProt: A0A1B7YUI5
LinkDB
Position
1:complement(2905305..2906571)
AA seq 367 aa
MFPLPGAPRQQPIDPSKLQAIMNQPGGQVNSAALKPSNSRQAKRLLINNLPPSATEESIQ
SFFNLQLNGLNIIESADPCTSCQVSKDNSFAVVEFRNASEATIALALDGISMEADDATNG
EAANQGLSIHRPKDYIVPAVVDDVPYEPGVVSNVVIDTPSKLSIANLPTYLSDEQVSELL
VSFGELKAFVLVRDRSTEESRGIAFCEYVDPAATDVAIQGLNGMDLGDKKLRVQKASVGV
TQVAGVEMGVAAMSMLAGTTSTDSGETRVLQLLNMVTPEELMDNDDYEEIKEDVQEECSK
FGNVLDIKIPRPVGGSRQSAGVGKIFVRFENTESAKKALQALAGRKFADRTVVTTYFPEE
NFEVGAW
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgttccctctgcccggtgctccccgccagcagcccatagacccgagcaagctccaggcc
atcatgaaccagcccggcggccaggtcaacagtgcggctctgaagccgagcaactcgcgc
caggccaagcgactgctcatcaacaacctccccccctcggcgaccgaggaaagcatccaa
agcttcttcaacctgcagctgaacggactgaacattatcgagagcgccgacccctgcact
agctgtcaggtatcgaaggacaactcgtttgccgttgtcgagttcagaaacgcatccgag
gccaccatcgcgctggcccttgacggaatctcgatggaggccgacgatgccaccaatggg
gaagcagccaatcagggtctgtcaatccaccggccaaaggattacatcgtcccggctgtg
gtcgatgatgtgccctacgagcctggtgtcgtgtccaacgtcgttatcgatacgccaagc
aagctcagcattgccaacttgcccacctacctctcggacgagcaggtttcggagctgttg
gtgtcctttggtgagctcaaggcgtttgtccttgttcgcgacagaagcacagaggagtct
aggggaattgcgttctgcgagtacgtcgaccctgcggccacggacgttgccatccagggc
ctcaatggcatggacctcggcgacaagaagctcagggttcagaaggctagtgtgggcgtc
actcaggttgctggagtggagatgggcgtcgccgctatgtctatgctggctggaacaacc
tcaacggactctggggagacccgtgtcctgcagcttctcaacatggtgacgcccgaggag
ctgatggacaatgacgattatgaagaaatcaaggaagacgtccaggaggagtgctccaag
tttggcaacgtcctcgacatcaagattcctcggccagtgggtggcagcagacagtctgcc
ggcgttggcaagatctttgtcagattcgagaacaccgagtcggccaagaaagcgcttcaa
gcgcttgcgggacgcaagtttgcggacagaaccgtcgtcacgacctatttccccgaggag
aactttgaggtcggcgcttggtga

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