KEGG   Colletotrichum higginsianum: CH63R_00950
Entry
CH63R_00950       CDS       T08176                                 
Name
(RefSeq) TAP domain-containing protein
  KO
K14284  nuclear RNA export factor
Organism
chig  Colletotrichum higginsianum
Pathway
chig03008  Ribosome biogenesis in eukaryotes
chig03013  Nucleocytoplasmic transport
chig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CH63R_00950
   03015 mRNA surveillance pathway
    CH63R_00950
   03008 Ribosome biogenesis in eukaryotes
    CH63R_00950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_00950
   03009 Ribosome biogenesis [BR:chig03009]
    CH63R_00950
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CH63R_00950
   mRNA cycle factors
    Stress granule specific factors
     CH63R_00950
Ribosome biogenesis [BR:chig03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    CH63R_00950
SSDB
Motif
Pfam: NXF_NTF2 TAP_C LRR_NXF1-5 LRR_4 LRR_8 RRM_9 NTF2 LRR_9 UBA_8
Other DBs
NCBI-GeneID: 28860032
NCBI-ProteinID: XP_018164287
UniProt: A0A1B7YUP4
LinkDB
Position
1:complement(3094442..3096642)
AA seq 656 aa
MAPPRAPRSMTSQPARDTRNSTVGAKTSRGGGIQKRRGGRTQVDRDGDLDMGSAAGGSGT
RRPNSRAAPADTNNSRPRGSTRSGAPSGKPGSKVHQAIARHLDTGDGNDLVSRRKPQSSG
LVWLTVKGLKESKAASNDDGGLRDLLMFLERKATTLSGRNKTVHIKKSSLRGDLVNIAAS
KEDAEEILKVNTFTFAGTQLEISDSDGSIAKANEASAAAQETKQKLQSIMSLRYDMENKL
LRLDALNQDEGLIQMGMLESKDRAEKLFKVMMRICDELFKTPQAKIDAIHSISLANNNID
TVAQVEEMADTFPDLKNLDLSGNQIVSVAGLWRWRQKLKKLETLYLTGNPLPVAEPKVVL
ELLHFFPKLQVLNGEQLTPERIAEIKAAGRPKPIPQRGPDFRDVAGIGEAFLLEFFLGFD
TDRTGLLAKYYDDNSQFSLAVDTHSVRDENLPQPLPWSSYIKQSRNLMKITTPAARAARL
ITGREATWNLWNDLPKTQHPDIKSDISKYIMDCHLLPGLADPTGQTAGGVDGMIISVHGQ
FEECDKSGKTGLRSFSRTFVLGPGRPNSNPIRVVSDMLSLRAYNPLPNIFVAEGQAPSAQ
EQEQRQAMIVELSKQTTMTPTYSEMCLSDVAWDFTRALAVFHEKKAQLPAEAFASV
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcgcctccacgagctcctcgcagcatgacgtcgcagcctgcgcgcgacacccgtaac
tctactgttggggccaagacgtcgcgcggtggcggcattcagaagcgccgcggtggcaga
acccaagtcgacagggacggagaccttgacatgggtagcgccgccggaggaagtggcaca
cggcgaccaaacagcagagcagccccggctgacacgaacaactcgcgacctcggggatca
acaagatctggcgctccctccggcaagccaggctcgaaagtacaccaagcgattgcccga
cacttggacactggcgatggaaacgatctggtatcaaggaggaagccacagagctctggc
ctcgtctggctgaccgtcaagggtctgaaggagagcaaggccgcaagcaatgatgacggc
ggtctacgtgatctgttgatgttcctggagcgaaaagccaccaccctgtccggccgcaac
aaaacggtgcacatcaagaagtcgagtttgagaggggacctggtcaacattgcggcaagc
aaggaagatgcggaggaaattctcaaagtcaataccttcacgtttgctggaacgcagttg
gagatctctgatagtgacggatcgatcgccaaggcgaacgaagcatccgcggcagcgcaa
gagacaaagcagaaactccaaagcatcatgtcactccgttacgacatggaaaacaagctc
ttgagactggacgccctgaaccaggacgaaggcctgatacaaatgggaatgctggagtct
aaagacagagccgagaagctcttcaaggtcatgatgaggatttgcgacgagctcttcaag
acaccccaagccaagatcgatgccatccacagcatcagcctggccaacaataacatcgac
actgttgcgcaagtcgaggagatggcggatacgttccccgatctcaagaacctcgacctc
agcgggaaccagatcgtgtctgtcgcgggcctgtggagatggcgccagaagctcaagaag
ctagagaccctgtacctgacgggcaacccactgccagtcgcggagcccaaggtggtgctc
gagctgttgcacttcttccccaagctgcaggtcctgaatggtgagcaattgacaccagaa
cggattgcggaaatcaaggcagcaggtcgaccaaagccgattccccagcgcggacccgac
ttccgtgacgtagccggcatcggagaggccttcctgctcgagttcttcctcggcttcgac
acggaccgcacaggtctactagccaagtactacgacgacaacagccaattctctctggct
gtggacacccattccgtcagggacgagaatctgccacagccgctcccctggtcttcatac
atcaagcagtctcggaatctgatgaagatcacgaccccagccgcccgagccgcgaggctc
atcaccggaagggaggcgacgtggaacctctggaacgaccttccgaaaacacagcacccg
gacatcaagtcggacatcagcaagtacattatggactgccatctcctgcctggtctcgcc
gacccgaccggccagaccgccggcggagttgacggcatgatcatctccgtgcatggccaa
tttgaagaatgtgacaagtccggtaagacgggtctccgaagcttttctcgcacattcgtc
ctgggacccggacgacccaacagcaaccccattcgcgtcgtgagcgacatgctctccctc
agggcctacaacccgctccccaacatcttcgttgccgagggccaagccccgtcagcgcaa
gaacaagaacagcgccaggccatgattgtcgaactatcaaagcagacgacaatgacaccc
acatactcggaaatgtgcctgtccgacgtcgcgtgggacttcaccagggccttggcagtc
tttcacgagaaaaaggcacaattgccagccgaagcattcgccagcgtctag

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