KEGG   Colletotrichum higginsianum: CH63R_01067
Entry
CH63R_01067       CDS       T08176                                 
Name
(RefSeq) Fms interacting
  KO
K13174  THO complex subunit 5
Organism
chig  Colletotrichum higginsianum
Pathway
chig03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CH63R_01067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_01067
   03041 Spliceosome [BR:chig03041]
    CH63R_01067
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CH63R_01067
Spliceosome [BR:chig03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CH63R_01067
SSDB
Motif
Pfam: FmiP_Thoc5 SPATA1_C Laminin_II Casc1_N
Other DBs
NCBI-GeneID: 28860149
NCBI-ProteinID: XP_018164404
UniProt: H1VFJ5
LinkDB
Position
1:complement(3580697..3581471)
AA seq 214 aa
MAVNDLVSDKKLGAVLQTSGDAQNQALKLLQLLSDIARAEETGGAVEQLQATLSKEQKLL
LTNISQLRGLHRSANFDARDTKAQTAEARHEVDRLHLQLQNLYYEQRHLEGEIDACGSYD
HTYQKLSLIPVESFVALHPEHADDDENAMMVARIGHERAEREALEQQRLELVGRKQKLIA
DNKKRKDDLANLDKDLEKFIDAAKPIQELFEKVV
NT seq 645 nt   +upstreamnt  +downstreamnt
atggccgtaaacgacctggtatcggacaagaagttgggcgctgtcttgcaaacctccggc
gacgcccagaaccaggctctcaagctgctgcagctcctctccgacatcgcccgggccgag
gagaccggcggcgccgtcgagcagctgcaggcgacgctctccaaggagcagaagctgctg
ctcacaaacatctcccagctgcgtggtctgcatcgctccgccaacttcgacgccagggac
acaaaggcccagactgccgaggcgcggcacgaggtcgaccgcctacacctccagctgcag
aatttgtactacgaacagaggcacctcgagggcgagatcgatgcgtgcgggtcctacgac
catacttaccagaagctctctctcatccccgtcgaaagctttgttgccctgcatccagag
cacgctgacgacgatgagaacgccatgatggttgcacgaattggccacgagagagcggag
cgggaggccctcgagcagcagaggctggagcttgtaggaaggaagcaaaagctcatcgcg
gataacaagaagcgcaaggacgacttggccaacctcgacaaggaccttgagaaattcatc
gacgctgcgaaacccatccaagaactcttcgagaaggtggtctga

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