Entry |
|
Name |
|
KO |
|
Organism |
chig Colletotrichum higginsianum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:chig00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_01067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:chig03019]
CH63R_01067
03041 Spliceosome [BR:chig03041]
CH63R_01067
Messenger RNA biogenesis [BR:chig03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CH63R_01067
Spliceosome [BR:chig03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CH63R_01067
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(3580697..3581471)
|
AA seq |
214 aa
MAVNDLVSDKKLGAVLQTSGDAQNQALKLLQLLSDIARAEETGGAVEQLQATLSKEQKLL
LTNISQLRGLHRSANFDARDTKAQTAEARHEVDRLHLQLQNLYYEQRHLEGEIDACGSYD
HTYQKLSLIPVESFVALHPEHADDDENAMMVARIGHERAEREALEQQRLELVGRKQKLIA
DNKKRKDDLANLDKDLEKFIDAAKPIQELFEKVV |
NT seq |
645 nt +upstreamnt +downstreamnt
atggccgtaaacgacctggtatcggacaagaagttgggcgctgtcttgcaaacctccggc
gacgcccagaaccaggctctcaagctgctgcagctcctctccgacatcgcccgggccgag
gagaccggcggcgccgtcgagcagctgcaggcgacgctctccaaggagcagaagctgctg
ctcacaaacatctcccagctgcgtggtctgcatcgctccgccaacttcgacgccagggac
acaaaggcccagactgccgaggcgcggcacgaggtcgaccgcctacacctccagctgcag
aatttgtactacgaacagaggcacctcgagggcgagatcgatgcgtgcgggtcctacgac
catacttaccagaagctctctctcatccccgtcgaaagctttgttgccctgcatccagag
cacgctgacgacgatgagaacgccatgatggttgcacgaattggccacgagagagcggag
cgggaggccctcgagcagcagaggctggagcttgtaggaaggaagcaaaagctcatcgcg
gataacaagaagcgcaaggacgacttggccaacctcgacaaggaccttgagaaattcatc
gacgctgcgaaacccatccaagaactcttcgagaaggtggtctga |