Colletotrichum higginsianum: CH63R_01162
Help
Entry
CH63R_01162 CDS
T08176
Name
(RefSeq) Nuclear import and export protein
KO
K14289
exportin-5
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_01162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chig03016
]
CH63R_01162
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_01162
Transfer RNA biogenesis [BR:
chig03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CH63R_01162
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
CH63R_01162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
APC1_C
IFRD
Arm
Motif
Other DBs
NCBI-GeneID:
28860244
NCBI-ProteinID:
XP_018164499
UniProt:
A0A1B7YVJ7
LinkDB
All DBs
Position
1:3926753..3931232
Genome browser
AA seq
1284 aa
AA seq
DB search
MDGQTVNGAAAMDQNVTSANGGNADTISQIHQALEVIHSPYSSNESRRDAQLFLENLKTI
DEAPFHGFTLASNKSQSPVVRHYALSLLEHAIKQKWIQYNKEQSIMLREWVLELCRSLSR
DDPLYIRNKTAQLWVEVAKRCWGTEWMDMDSLLVRLWQIPESPVHKELVLFVLETLSDEV
FNGDDAVVAMREGVLSRSCVEVFTPAPVLSEAFPNRAAGPEVRSGAEGWLSRVSEFLSQC
LNGDAQNNDQIRSCAVKSLSVFYSLMPWAIPKSVAVANCVPVMCRALATPEVSVQKASLE
ALHALYSRSNFSEQEFKDLVAPMYDASSVDLLKRLFEWSAVDVEDIDEDKYQFGKKFSEM
LSLLGNYLDRRFSAVPTNADVSGFLNLLLLTVQSQSLIVAIPVLATWTRLLNNRLIGQSP
ANNHLVGPLLEVCGSRLIRYENLPEDTQDPTFLFLMEDTDTVPERHAFLGNYRRYSTQVI
ETIVQLKLSDAVYHVLGQAEQALQHLYDDSPPMDVTKYVKHSMPVLRVDAQFTVIEAALK
GYMKWRANTTQQSLPDHEQQRVALERDLESWCTKLLEMKFEDPLIRKRVLQLLVAFSTTA
LDKNPGFMLKVLEHILMTWPAPQPEHRAFNEAIKDFQSESMVELQRLASKVPDHLLAVYD
QIEARVNDMISSGTLDEKRQIAYQSFLFIIVHRASNIDPANQVQRLQEFIKPVTSSWQNQ
ELKNALSSYSGFCELMALDKAKRYLTSHRVHEVKDWGSCELDAEGLALQSELEERQKMLP
LRPTKSFLSFSVEKLEKSSTPFQISYQLWNDSFPMILPDLLQFLSHAHASHNPDNWAELP
ADTRSVVGNVLSDRFWQAGISEGSKDEFYARVMDKKNTLEGLASTIRGTVRFVRETCYAI
IYCMSRLEMQFYGFSELPGPLAQALFQNSFHLSAHQQINLLNLVRYLVDDCPLEQREHFL
PPLLAACFQQMDAKINAEWENLERQQAIQAAADALTEEMKSESILRQVTYTAVIMVADFL
DPTKKNPPPLNSQNGHEQPRKYPSLRKFCLMQSTIVEPLLLFCTHAIRMRDTRCCSIILR
VFRSIVPDFHLTEPRSPKSIPQDDTEAGPPNRDPYLDTTPVSPEAATAIREYIASDVLRA
CITSFHEPYFVDLQKDLASLIAAIVVYYSPVTSTPREVLMSLPNIRQADLDRLNEFSSKP
ASHTRQQRALVLDLLKDLKGVSIAEMGKLPKNGGFGPSKRSNRSKMAQEFMTPANETRTR
GGGVADTGRATPDALEGVANLFEG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcagacggtcaacggcgcagctgccatggaccagaacgttacttccgcgaat
ggcggaaacgccgacaccatctcgcaaattcaccaggcactcgaggtcatacacagcccc
tattcctcgaacgaatcccgccgagacgcccagctcttcctcgagaacctcaagaccata
gacgaggcccctttccatggcttcactctcgcctccaacaagtcgcagtctcccgtcgtg
cgccactatgccctgtctcttctcgagcacgcaatcaagcagaaatggatccagtacaac
aaagagcagtcaatcatgctgcgcgagtgggtgctggagctctgtcgcagcctgtcaaga
gacgatccgttatacatcaggaacaagacggcccaattgtgggtggaagtcgccaagaga
tgctggggcaccgagtggatggacatggacagccttttagtccgtctctggcagatacct
gagtctcccgtgcacaaggagcttgttctctttgtgctcgagacgctatccgatgaggtt
ttcaacggcgacgacgccgtcgtcgccatgcgcgaaggcgtgcttagcagaagctgcgtc
gaagtcttcaccccagcccccgtcttgagcgaagccttccccaacagagccgcgggcccc
gaggtgcgctctggggcggaaggatggcttagcagggtatccgagtttctcagtcaatgc
ctcaacggtgacgcccagaacaacgaccagattcgctcctgcgccgtgaaatccttgtcc
gtcttctattccctcatgccctgggccattcccaagtctgtcgctgtcgcaaactgcgtt
cctgtcatgtgcagagctctggcaactcctgaagtctccgttcaaaaggcctctctagaa
gctctccatgcgctgtactctcgctcgaacttctccgagcaagagttcaaggaccttgtc
gcgcccatgtacgacgccagctcggtagatctactcaagaggctctttgaatggtctgcc
gtggatgtcgaggatatcgacgaagacaagtatcaattcggcaagaagttctcagagatg
ctatctctgcttggtaattaccttgatcgtagattttctgccgtacccacaaacgcagac
gtcagcggtttcctcaacctgttattgctcaccgtacagagccaaagcctcattgttgca
attcctgtcttggcaacttggactcgcctcctcaacaataggctgattggacagagcccg
gccaacaaccacctcgttggtcctcttctcgaggtgtgcggctctcgcttgatcagatac
gaaaatttgcccgaggacacgcaagaccccacgttcttgttcctcatggaggatactgac
actgtccccgagagacatgcgtttctgggcaattacagaaggtacagcactcaggtcatc
gagaccattgtccagctgaagctgtctgatgcagtctaccacgttcttggccaagcagag
caggctttgcaacatttgtacgatgacagcccaccaatggacgtcacaaaatacgtgaaa
cactcgatgccggtcctgcgtgtcgatgctcaattcacagtcatcgaggcggcacttaag
ggttatatgaagtggagggcaaacaccacgcagcagagcttgccagatcatgagcaacag
cgtgtcgccttagagagagatctggaatcatggtgcaccaaactccttgaaatgaagttt
gaggatcccctgatacgaaagagagttttgcaactcttggttgccttctcgaccacagcc
ctcgacaagaacccaggattcatgctgaaggttcttgaacacattctcatgacctggccc
gcacctcagccggagcatcgtgccttcaacgaggccatcaaagacttccagtccgaaagc
atggtggaactgcagaggcttgcttcaaaggtgcctgatcacttgcttgcagtatacgac
caaatagaggcacgagtcaacgatatgatctcatcaggcacgttggacgagaagcgccag
attgcctatcagagctttctcttcatcatcgttcaccgggcttccaacattgatccggcc
aatcaggtccagcgtttgcaagagttcattaaacccgtgacgtcttcgtggcagaaccag
gaactcaagaatgcgttgtcgtcttactcgggcttttgcgagctgatggctttggacaag
gccaagaggtatctgacaagccaccgtgtccacgaagtcaaagattggggttcttgcgaa
ctggacgcagaagggctggctttgcagagcgagttggaagagaggcaaaagatgttgccg
cttcggccgacaaagtctttcctctcattctcggtcgagaagctggagaagtcgtctact
cctttccagatctcttatcagttgtggaacgatagcttccccatgattctgccagatctt
ttgcaatttctcagccacgcacacgcctcacacaacccggacaactgggcggagctgccg
gccgatacgcgatctgttgtcggcaatgtgcttagtgaccgtttctggcaggcgggtatc
tcagagggcagcaaggacgagttctatgctcgtgtcatggacaaaaagaacacacttgaa
gggcttgcctcgactatccgcgggaccgtcaggtttgtccgggagacctgctacgccatc
atctactgcatgagccgcttggagatgcagttttacggcttcagcgagctgcccggtccg
cttgcgcaagctctctttcagaactctttccacctctcggcgcaccagcaaatcaactta
ctcaaccttgttaggtacctagtggacgactgtccattggagcaacgagagcacttcctc
cccccgcttctggcagcgtgtttccagcagatggatgcgaagatcaatgcagaatgggag
aatctagagcgacagcaggctatccaggctgctgccgacgctctcaccgaagagatgaaa
tctgaaagtattctgcgccaagttacctacactgcggtgatcatggtggcggatttcctg
gaccccacgaagaagaatcctcctccgttgaattcgcagaatggccatgagcaaccacgg
aaatatccgtcgcttaggaaattttgcttgatgcagtcgaccattgtagagcctctgctg
ctcttttgcacccacgccatccgcatgcgagatactcggtgctgcagcataatattgcgg
gtgttccgctctatcgtcccagactttcacctgacggaaccgcgttcgccaaaatccatt
cctcaggatgatactgaagcggggccacccaacagggacccttatcttgatacaacgcca
gtgtctccagaagcagccaccgccatccgggaatacatcgcatcagatgtactccgggcc
tgcatcacttccttccacgaaccttacttcgtagacttacagaaagatttggcgtctttg
attgctgccatcgtggtatactacagtcctgtcaccagcacgcctcgagaagtgcttatg
tcgctgcccaacatcagacaagcagaccttgacaggctaaatgagttttcttccaagccg
gcctctcacacacgccaacagcgtgcgctcgtgcttgatctcctcaaggacctcaagggc
gtgagtattgctgagatggggaagctccccaagaacggcggcttcggcccaagcaagagg
tcgaaccgcagcaagatggcacaagagttcatgacgcctgcaaatgagacaagaacgcgg
ggcggcggggttgctgacacaggacgggctaccccagatgcccttgagggagttgccaat
ttgtttgagggttga
DBGET
integrated database retrieval system
