Colletotrichum higginsianum: CH63R_01232
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Entry
CH63R_01232 CDS
T08176
Name
(RefSeq) Eukaryotic translation initiation factor eIF2A
KO
K15026
translation initiation factor 2A
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_01232
03012 Translation factors [BR:
chig03012
]
CH63R_01232
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CH63R_01232
Translation factors [BR:
chig03012
]
Eukaryotic type
Initiation factors
eIF-2A
CH63R_01232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
28860314
NCBI-ProteinID:
XP_018164569
UniProt:
H1VA98
LinkDB
All DBs
Position
1:complement(4130508..4132653)
Genome browser
AA seq
692 aa
AA seq
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MASSQLQFAYRTQKGIGLFDAAPTYQPLAGFTKPEGNLRCCTYSPCGRYFAWASPEVVTV
VDASNGQQVLALPILNVYELGFSPLGTFLVTWERPAKDENGDATKNLKVWRTVEDGVAGA
DKVPLGKYVQKSQGGWNLQYTADEKFCARQVTNEVQFYESHDLGTVWNKLRVEGVADFAL
APGRSHSVAVFIPERKGQPAAVKVYNVPQFTSPISQKTFFKGDKVQLKWNNLGTSILVLA
QTDVDKSNKSYYGETTLYLLSVNGSFDARVSLDKEGPIHDVTWSPNSKEFGVVYGYMPAK
TTIFNHRAVATHSFPLGPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDFRKLHTIES
GNPSVCTWSPDSRYIITATTSPRLRVDNGVKIWHASGPLMYNEDMVELYHVVWRPQAVDK
VAGGDPLNPVPTPHASAATYLGTVKTPSKPAGAYRPPGARGLATPLHFKREDEGGAAHVS
MNNGSAAIGPNGFGRPRRGVPGAEFAGASGGASKIPGADTADGDENLSKAALKNKKKRNN
KKREGEANPEGQNGGGASLAPPPRDFGSGAGHEGRSPERRGGAGGNHRHRSHSRNPGAGQ
SRNRSNTHRGQNGAPQVPNAQAQQAVPAAGADADASQNPNSKKIRSLQKKVRAIEDLEMR
LAGGEKLEDTQMKKIGTKSSVLKELEALEREL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgcagttgcagtttgcctaccgaacccagaagggcatcggcctgtttgat
gctgccccgacctatcagcctctcgctgggttcaccaagcccgaagggaacctccggtgt
tgtacatactcgccctgtggccgctactttgcctgggcgagccccgaagttgttacggtt
gtcgacgcctccaacggccagcaggttcttgccctccccatcctcaatgtctacgagctc
ggcttttctcccctcggtaccttcctcgtgacctgggagcgccctgccaaggacgagaac
ggtgatgcgaccaagaacttgaaggtctggcgcactgtcgaggacggtgtggccggcgcc
gacaaggtgcccctgggcaagtacgttcagaagtctcagggaggctggaaccttcagtac
acagccgacgagaagttttgtgcccgccaggtcaccaacgaagtccagttttacgagagt
cacgacctgggcaccgtgtggaacaagttgagggttgagggtgtcgccgacttcgccctg
gcacccggccgctcccactctgttgccgtcttcatccccgagcgcaagggacaacctgcc
gccgtcaaggtctacaacgtgcctcagttcacctcgcccatctctcaaaagaccttcttc
aagggcgacaaggtccagctcaagtggaacaacctgggcaccagcatccttgtgctggcc
cagaccgacgtcgacaagtccaacaagagctactacggcgagactacgctctacctgctg
agcgtcaacggctccttcgacgcccgcgtcagtctcgacaaggagggccccatccacgac
gtgacctggtccccgaactccaaggagttcggtgttgtttacggatacatgcccgccaag
accaccatcttcaaccaccgagccgtcgctacccactcgttccccctgggccctcgcaac
accatcatcttttcgcccacgggacgcttcgccctcgttgctggtttcggtaatctggct
ggccagatcgacgtctatgacctcgagaaggatttccgcaagctgcacaccattgagagt
gggaaccccagcgtctgcacgtggagccccgacagccgttacatcatcacggccaccact
tctcctcgccttcgcgtcgacaatggcgtcaagatctggcacgccagcggtcccctgatg
tacaatgaggacatggttgagctgtaccacgttgtttggaggcctcaagccgtggacaag
gttgcgggcggagatccgttgaacccggtccccaccccgcacgcctctgcggccacgtac
ctcggcactgtcaagaccccaagcaagcctgcgggagcttaccgtccccctggtgcccgc
ggtcttgccaccccgcttcatttcaagcgtgaggatgagggtggtgcagcccacgtcagc
atgaacaacggctctgcggccatcggacctaatgggttcggccgccctcgccgtggtgtg
cctggcgccgagtttgcaggtgcctccggcggcgcttccaagatccccggagccgacacc
gccgatggcgatgagaatttgtcaaaggcggcgttgaagaacaagaagaagcgcaacaac
aagaagagagagggcgaggcgaaccccgaaggccagaacggcggcggtgcttcgctcgcc
ccgcctcctcgcgacttcggctcgggagcgggccacgagggccgtagccccgagcgccgt
ggcggtgccggaggtaatcacagacatcgcagccactctcgtaacccgggtgccggtcag
tcccgtaacaggagcaacacgcaccggggtcagaatggcgcgcctcaggtgccgaacgcg
caagcccagcaggccgtgccggcggccggcgctgatgccgacgcctcgcaaaacccgaat
tccaagaagatccgcagcctgcagaagaaggtgcgggccattgaggatctcgagatgaga
ctggccggtggcgagaagctcgaggacacccagatgaagaagattggcaccaagtcctct
gtgctcaaggagctggaggctctcgagagagagctgtag
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