Colletotrichum higginsianum: CH63R_01234
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Entry
CH63R_01234 CDS
T08176
Name
(RefSeq) Transcription factor
KO
K20826
RNA polymerase II-associated protein 1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_01234
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CH63R_01234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
28860316
NCBI-ProteinID:
XP_018164571
UniProt:
A0A1B7YVS9
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Position
1:complement(4138868..4140154)
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AA seq
428 aa
AA seq
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MNTLMLVGDIVEKETPPAKPPVVFDDIDAAPTGFPAHKKRTRVSAFKQQRQGKPITGAQT
AAATSSISAPQPDDNGGGSDSQKSFEAAERRRIDRENRQKLEDMSPDDIARERRELMESL
DPSLIQRLLGRANIDEQHGPNPFDPPAAEDTKAKGAPAPAPEIKIEDTSAPPQPQAEPRP
ASKSAPKSVSFAEVEDSEPSPRPLANEDNPPSAPPEDLFPLNSQPDKTHFPQPPALPDLD
PSHPDFLATLHEKFFPNLPADPSKLAWMAPIPTAHSPADRESPYYPGQPSLPISALRFDF
KGGLIPPKLSRSIPVSKGLHHHGQAPEAAGYTIEELAIYARSAVPAQRCVAFQTLGRILY
RLGKSEWGNGEEDSLARGIWSSIQEGRVLESLSEAAIVEGGHRGSRAYATEALWLFEKGG
WREQWSGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactcatgttggtcggcgacatcgtcgaaaaagagacgccacccgcgaagccc
cctgtcgtattcgacgacatcgacgccgccccgaccggcttccccgcacacaagaagcgc
acccgcgtgtccgccttcaagcagcagcgacagggcaagcccattactggcgcccagaca
gcggcggcaacgagctcaatctctgcaccgcaaccagacgataatggcggcggcagcgac
tcacaaaagtccttcgaggccgccgagcgccgccggatcgatcgcgagaacagacagaaa
ctagaggacatgagcccagacgacatcgcgagggagaggagggaactgatggaatcgctc
gacccgtcgctcatccaacgcctcctcggcagggccaacatcgatgagcaacacggtccg
aatcccttcgatccgcccgccgcggaagataccaaggccaaaggggcgccggctccggcg
ccagagatcaagatcgaagacacctctgcgccgccgcaaccccaggccgagccccggcca
gcatcaaagtcagctccaaaatccgtgtcctttgccgaggtcgaggactcggagccctcg
ccacggcccctcgcgaacgaagacaaccccccctcggcgcccccggaagacctcttcccg
ctcaactctcagcccgacaagacgcacttcccccagccgcccgcccttcccgaccttgat
ccatcccacccggatttcctcgcgaccctccacgagaagttcttcccgaacctccccgcc
gacccaagcaagctcgcgtggatggcgcccatccccaccgcccacagcccggcggaccgc
gagtccccttactacccgggccagccctcgctgcccatctcggcgctgcgcttcgacttt
aagggcggcctgattccgcccaagctgagcaggtcgatccccgtgtccaaggggctgcac
caccacggccaggcgcccgaggcggccgggtacacgatcgaagagctggccatctatgcg
cggagcgctgttccggcgcagcgctgcgtcgcgttccagacactgggccggatactgtac
aggctgggaaagagcgaatggggcaacggcgaggaggacagcctggcgaggggcatatgg
agcagcattcaggaggggcgggtgctggaaagcctgtcggaggcggccatcgtcgagggc
ggccacagaggcagccgcgcgtatgcgacggaagcgctttggctgtttgagaagggcggc
tggagagagcagtggtctgggaggtaa
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