Colletotrichum higginsianum: CH63R_01262
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Entry
CH63R_01262 CDS
T08176
Name
(RefSeq) Snare-dependent exocytosis protein
KO
K08518
syntaxin-binding protein 5
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_01262
Membrane trafficking [BR:
chig04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CH63R_01262
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
CH63R_01262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
Beta-prop_IFT140_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
PEP5_VPS11_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
28860344
NCBI-ProteinID:
XP_018164599
UniProt:
A0A1B7YVU7
LinkDB
All DBs
Position
1:complement(4256774..4260076)
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AA seq
1048 aa
AA seq
DB search
MTLVSVARLQGLGLLPTERVSPRQAGTFGRPKSCGTAPELSLPLPGSLPPTTSPEIQLAP
LSRTMAAFLRQKQTGLQNDLSASILPDLFAPDYQSAYGLNSQVSCLAYEPIQSLLAIATN
ESKFGPGKIFVFGQGRVHKVIEPPRRTSFRSLHFAANRLVSLDAKNELGIWDLDTAKRIA
GLVCPGHVACLLTDPMLDWAFLGLATGEVLAYDLDRENITRSFRLPNFWKERDPTARVVG
LVSIALHPRDIGQMLIAYTTGVVIYSFKQNKPIKFFEYVLQPGAPGGGGEPPDTVRRPRV
THALWHPTGTFVMTAHDDGSMVFWDPKDGRIITARTITEMKVDQPSPKAGHIGYTEPYAR
IAWCCKENPDDTGLLIAGGLSPDAPQRGLTFIELGQTPIYATSSWQVLQDHLQGKRQITL
PTPPGAQVADFLLIPRSSPYFAGAQDPIAVMTLLSSGELLTMSFPSGYPISPTNQLHPSI
SFVHPYVNKFAVQTLDRGRWLGMVETRNQGEPLLKGGAEASKPKRRYEGRTIFQVAHGDS
TVRLWDAGHADEIENPTMLQVDVARALDRYEDIDITAMNMAPNTGEFAVGTRTGEVVLYR
WAGNRFFGKDHHQDLPPNPGSLTDISSRAEPGLKEGLQPWHLYEMMQGPISAICVSDVGF
VGIGSEGGFFSVIDLRGPSVIFQISMTEFAKHEKRSSFLKGSHGNNQGKEWPVAIEFSVM
TLEGDNYSSICCFVGTNLGRVATFKLLPAGNSYTVKLAGFQQFDGKVVALCPIQADSGKP
AHATGPVVAGLRNGQQVHGVLVAVTQTEIRIFKPASAKGASKTFDDMLCDAACVTEFELH
GVAIVGVFGDRTTRAYSIPGLKEIGKAPLPMLDSSRSTSSVVTQTGDIFGWTGPSEVAVL
SVWGTGKDLPVSADILINPELVTPPRPTISNMQWLSGTQHVSPTDLDLLIDPNRPPSKRM
VAAAAAEARAARTGGQAGPSNTGAAGSNEGWGDYLTRQLNERTEKLNIMSDSMDNLQNQS
QGWADDVGKFMNKQKRNVVLGGLKSKFF
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgacgttggtctcggtcgcgcgcctgcagggtcttggacttttgcccaccgagcgagtg
tcaccccgccaagcgggaaccttcggccgccctaaaagttgcgggactgccccagagctc
tcactccctctcccgggctctctccctccaacaacatctccagaaatccaacttgcaccg
ctctctcgaaccatggccgccttccttcgacaaaagcagacaggcctgcagaacgacctg
tctgcgtcaatcctgcccgacctctttgctcccgattatcagtccgcatatggtctcaac
tcgcaggttagctgcctagcctatgaaccgatacagtcgctcctcgcaatcgccaccaac
gaatccaagttcggccctggcaaaatcttcgtcttcggccaaggcagagtccacaaggtt
atcgagccgccaaggcgcacatcctttcgctcgctccacttcgccgccaaccggctcgtc
tctctcgacgccaagaacgaactgggaatatgggatctcgacaccgcgaagcgcatcgct
ggcctcgtctgtcccggtcatgttgcctgcctcctcacggaccccatgctcgattgggcc
ttccttggcctggctaccggagaagtcttggcttatgatttggacagggagaacatcacg
aggtcgttccgactgccaaacttctggaaggagagagacccaaccgcacgcgtcgttggg
ctggtgagcatcgcgctgcacccgagagacattggccagatgctcattgcgtacacgacg
ggggttgtcatctactcgttcaagcagaacaagccgatcaagttcttcgagtatgtgcta
cagcccggtgcccccggtggaggaggagagccaccggacacggtgcgtcggccgagggtg
acgcatgccttgtggcaccccacgggcactttcgtcatgacggcacacgatgacggcagc
atggtgttctgggacccgaaggatggccgaatcatcacggccaggaccataacagagatg
aaggttgaccagccatcgccgaaagccggccatatcggctacacggagccatacgcacgc
atcgcctggtgttgcaaagaaaatccggatgacactgggctgctcatcgccggtggactc
agcccggatgctcctcaaagggggcttaccttcatcgaacttggacaaacgcccatctat
gccacctcctcatggcaagttcttcaggaccacttacagggaaaacgccaaatcaccttg
ccaacgcctcctggtgctcaagtcgccgattttctacttatcccccgttcctcgccatac
ttcgctggcgcacaggatcccattgctgtaatgacgctcctctcttctggcgagcttctg
accatgagctttccctcgggatacccgattagcccgacgaaccaactgcacccgtccatc
tcctttgttcacccatatgtgaacaagtttgctgtgcaaaccctagaccgtggacgctgg
ctgggcatggtggagaccaggaaccagggcgaaccacttttgaaaggcggtgccgaggcg
tcgaagccaaagcgcagatacgagggtcgcaccatcttccaagtagcccatggcgacagc
acggtgcggttgtgggatgccggccatgctgatgaaatcgagaacccgaccatgttgcaa
gtcgacgtcgcacgtgcgcttgaccgctacgaagatatcgacatcactgccatgaatatg
gcaccaaacacgggcgagttcgcggtgggaacccgtaccggcgaggtagtcctttacaga
tgggccggcaacaggtttttcggcaaagaccaccaccaggacctcccgccgaacccgggg
tccctgactgatataagctcgagggcagagcccggtctcaaggaaggcttgcagccatgg
catctgtatgagatgatgcagggccccatctcagccatctgcgtttcggatgttgggttt
gtaggcattggatcggaaggtgggtttttcagtgtcatcgaccttcgaggcccctcggtc
atcttccagatatccatgacggagtttgccaagcatgagaagagatcatccttcctcaag
ggatcgcatggtaataaccaggggaaagagtggccggtggctatcgaattcagcgtcatg
acgctcgaaggcgacaactactctagcatctgctgcttcgtgggcactaacctgggacga
gttgctacctttaaactgctgcccgctggaaacagctacactgtcaaacttgctgggttc
cagcaattcgacggcaaggtcgtggctctatgtcctattcaggccgactctggcaagccc
gcgcacgccacaggacccgttgttgcagggcttaggaacgggcaacaggttcacggtgtc
cttgttgcagtgacacaaaccgagatccgaatcttcaagcctgcaagcgcaaagggcgca
tccaaaactttcgatgacatgctgtgcgatgcagcatgtgtcacggaatttgagcttcat
ggggttgccatcgtcggcgtatttggcgaccggaccactcgcgcgtactctattcccggc
ctcaaggagattggcaaggctccgcttcccatgctcgacagcagccgtagcacctcgtcc
gtagtgacgcagaccggtgacatcttcggctggactgggcccagcgaggttgctgtcctg
tctgtgtggggtactggaaaggacctcccggtcagcgcggatattctcattaaccccgaa
cttgtcacgcccccgcgacccaccatctcgaatatgcagtggctttctggcacgcagcat
gtctctccgaccgacctcgacctgctcatcgacccgaaccgcccgcccagcaaacggatg
gtcgcagccgcagcggcagaagctagggccgcgcgcactggtggacaagccggcccgagt
aacaccggtgccgccgggagcaacgaaggttggggcgactacctgactaggcaactcaac
gagcgcaccgagaagcttaacatcatgagtgacagcatggataatttacagaaccagagc
cagggatgggcagacgatgtgggcaagtttatgaacaagcagaagagaaatgttgttctt
ggcggcctcaagagcaagttcttctag
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