Colletotrichum higginsianum: CH63R_01312
Help
Entry
CH63R_01312 CDS
T08176
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
chig
Colletotrichum higginsianum
Pathway
chig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CH63R_01312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_01312
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CH63R_01312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
AAA_22
Motif
Other DBs
NCBI-GeneID:
28860394
NCBI-ProteinID:
XP_018164649
UniProt:
H1UVC8
LinkDB
All DBs
Position
1:complement(4472738..4475631)
Genome browser
AA seq
921 aa
AA seq
DB search
MSSRPELKVDDEHGFIRFFKSLPAVHEDTVRIFDRGDWYTSHGEDANFIARTVYKTTSVV
RTLGRDEKTGLASVTMTVTVFRQFLREALFKLGKRIEIWESTGGRMNWKVVKQASPGNLQ
DVEEDLGGQVEAAPMILAVKISTKTSEARSVGVCFADASVRELGVSEFLDNDLFSNFEAL
LIQLGVRECLIQMDKADKNKDPDLTKLKQIIGNCGVSVSERSAGEFGTKDIEQDLARLLK
DERSTTLLPQTDLKLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLSQFMKLDAAALKAL
NLMPGARDGAKSMSLYGLLNHCKTPVGSRLLSQWLKQPLMNKAEIEKRQQLVEAFVNDTE
LRQTMQEEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVIIRLPGFMGTLEGVMDEAYRD
PLDETYTTPLRGLSNSLAKLAEMVETTVDLDALDNHEYIIKPEFDDSLRIIRKKLDKLKR
DIDQEFSDAARDLKQEVGKKIFLENHKVHGYCMRLTRQEAGAIRNKSGYQECSTQKNGVY
FTTKTLQSLRREFDQLSQNYNRTQSSLVSEVVGVAASYCPVLERLAGILAHLDVIVSFAH
CSVHAPSEYVRPTMHKRGEGQTILKEARHPCLEMQDDVQFITNDVTLTRDKSSFLIITGP
NMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDSILARVGASDSQLKGVSTFMAEML
ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTAL
ADEHPQVHNLHVAAHIGGGGGENSKREVTLLYKVDDGVCDQSFGIHVAELVRFPDKVVRM
AKRKADELEDFTSKHEDLGLKYSKADMEEGSALLKEVLLRWKEEVDAGQMSKEEMVSKLK
GLVMANEKLLANPFFQSVKTL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgagacccgaattgaaggtcgacgatgaacacggcttcatccgcttcttcaag
tctctcccggctgttcacgaagacacagtccgaatatttgatcgaggtgattggtacact
tcacatggtgaagatgccaacttcatcgcccgtacagtatacaagacgacgtccgtcgta
aggaccctgggccgagatgagaagacaggcctcgcctccgtgacaatgaccgtcacggtc
ttccgacaattccttcgagaagcgctcttcaagctgggaaagagaatagagatatgggag
agcaccggcggccgcatgaactggaaggtcgtcaagcaggcgtctccgggtaacctgcaa
gacgtggaagaggatttgggtggccaggttgaggccgctccgatgattctcgctgtcaag
atatccaccaagacttccgaggccagaagcgtaggcgtctgcttcgccgatgccagtgtg
cgagagttgggcgtcagcgagttcctcgacaacgacctgttctccaacttcgaagctctg
ttgattcaactgggcgtcagggagtgcctcatacaaatggacaaggcagacaagaacaag
gacccggacctcacgaagctgaagcagatcatcggcaactgcggcgtctccgtctcagaa
cggtcggccggcgagtttggcaccaaggacatcgaacaggaccttgcgcgtctgctcaag
gacgagcgctcgaccactctcctgccccagaccgacctcaagttggccatgggctcggcc
gcggctctgatcaagtaccttggcgtgctccacgatccatccaacttcggacagtaccaa
ttgtaccagcacgacctctctcagtttatgaagctggatgcggcggcgctgaaggcgctc
aacttgatgcctggcgcccgggacggtgccaagtccatgagcctgtatgggttgcttaat
cactgcaagactccagtcggaagccggctgctgtcacagtggctcaagcaaccactcatg
aacaaggcagagatcgagaagcgtcagcagcttgtcgaggccttcgtcaacgacacagag
ttaaggcagacgatgcaggaggaacacctgcgttcggtaccagacctctaccgtctcgct
aagcggttccaaaggggcaaggccaaccttgaggacgtcgttcgtgcgtatcaggtcatc
atccggctgcctggcttcatgggaactttggagggcgtcatggacgaagcatacagagat
cctctagacgaaacctacacgacccctctccgcgggctttccaatagtcttgcaaagctc
gcggagatggtcgagaccactgtcgacctggatgccctagacaaccatgagtacatcatc
aagcccgagttcgacgacagcctgaggatcatcaggaagaagcttgacaagctcaagaga
gatatcgaccaagagttctcggacgcggctcgcgacctgaagcaagaagtcggcaagaaa
atcttcctagaaaaccacaaggtccacggatactgcatgagactcacgagacaggaagcc
ggcgccatccggaacaagtcgggttaccaggaatgctcgacgcagaagaacggagtctac
ttcacgaccaaaacactgcagagcctccgtcgagagttcgaccagctctcgcagaactac
aacaggacacagagcagcctggttagcgaggttgtcggcgtggcggcttcatactgcccc
gtcctcgagaggcttgctggtatcctggcccacttggatgtcatcgtctcctttgcccac
tgctccgtccatgcgccctccgagtacgtccgccccacgatgcacaagcgaggcgagggc
cagacgattctcaaggaggcccgccacccgtgcctagagatgcaagacgacgtccagttt
atcacaaacgacgttaccctgacgcgggacaagtcctcttttctgatcattacgggtccc
aacatgggcggaaagtcgacctacatccgccagatcggcgtcatcgccctcatggcgcag
atcggctgcttcgtcccctgtaccgaggctgagctgaccatcttcgactccatcctcgct
cgcgtcggcgccagcgactcccagctcaagggcgtgtcgacgttcatggccgagatgctt
gagacggctaacattctcaaatcggcaacagccgagtccctcatcatcatcgacgagctg
ggccgcggcacctcgacctacgatggcttcggccttgcgtgggccatctcggaacatatc
gtcaaggagatcggctgcttcgctatgttcgcgacgcacttccacgagctgacggcactg
gcggatgagcacccgcaggtccacaacctgcatgtggcggcgcacatcggcggtggcggc
ggcgagaacagcaagcgtgaggtgacgcttctatacaaggttgacgacggtgtgtgcgac
cagagcttcggtatccacgtggcggagctggtgaggttcccggacaaggtggtgcgtatg
gcaaagcgcaaggccgacgagcttgaggactttacctccaagcacgaggacctagggctt
aagtacagcaaggcggacatggaagagggcagcgcgctgctcaaggaggtgctgctgcgg
tggaaggaagaggtcgacgcggggcagatgagcaaggaggagatggtctctaagctgaaa
ggtttggtgatggcgaacgagaagctgcttgccaacccctttttccagtctgtcaagacg
ttataa
DBGET
integrated database retrieval system
