Colletotrichum higginsianum: CH63R_01336
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Entry
CH63R_01336 CDS
T08176
Name
(RefSeq) Transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
chig
Colletotrichum higginsianum
Pathway
chig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CH63R_01336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_01336
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_01336
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CH63R_01336
Coactivators
SAGA/TFTC/STAGA complex
CH63R_01336
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CH63R_01336
STAGA complex
CH63R_01336
TFTC complex
CH63R_01336
SAGA complex
CH63R_01336
SLIK complex
CH63R_01336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
28860418
NCBI-ProteinID:
XP_018164673
UniProt:
A0A1B7YVT3
LinkDB
All DBs
Position
1:4557122..4559682
Genome browser
AA seq
832 aa
AA seq
DB search
MNNQGQPGQPNPMAGQAVPGARQPPMYRPEMMRNLPILNDEEKAKYERGLRQLWNHYETH
PEESAQHQDAKKKIQDFTKMLLNKLQQRRMQVQQQQQQQQAQQQQAAQQQQQSQPAQPPA
PVQPAQPAQPQPQPQQQQQQQPAAAANQGTTGGVTVKTEPKTENNNPSATAEPAQTPTPA
PASVPTPTAPQQAPQQAPQTTQFPDHILAHIRQMTFNPPQGILDKGQESAVRWSNDYKAK
YLRALMQMDQQGNQMKRIDVHIKNQQEKGVLGADEQKQLQIRRDHAQKMYNEAHSFVTNF
RKSQEAINKARAAVAAAAAAGQTAASAAAASAASATGASAAAAGASAGAATSRPPSQASQ
QQQQQQQQQQQNSPAIATSQPPSTQPSAVQASPAPTAQNTPAMQNAQNPTTAVNAAIEAA
KNQQMANAAAGRGTPPQQQQQLPPQQAQQHQQQQAQQQAQQQQQLQQQQAQQQQQLHQQQ
QQQQYQQQQAQQQAQQQAQQQAQAQAAAQAQASTPSAQTPTTAAQPAQIQPGMAQGQHHP
PPVNTAIASVSAGGLPSAGTPTQRVATPQSAVPPGPGQALSHSAAVSRANQRMNSQTSAM
PSQQQQQQQQQQQQQATGTPGSAGAHAQGVMGSGAVPQQQHAHPTQPTQTLQSKLPIPKQ
LPEKATAVPQPVAMAGGAGAGRPTYTGGGGIAGGVMGQPAMAKIPAYVHEAEGDHVLSKK
KLDELVRQVCGGNAEGQEINMLTPEVEESVLAMADSFVDSVLETACRNAKERGSKVLEIR
DIQLVLERTYNIRVPGYSSDELRTVRKIQPSTAWITKMSAIQAAKVTSGKGE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccagggccagcctggccagccaaaccccatggctggccaagccgtgcctggt
gcgcgacagccgcccatgtaccgacccgagatgatgcgaaacctcccgattctcaacgat
gaagagaaggctaaatatgagaggggcctccgtcaactgtggaatcactatgagacgcat
cccgaagagtctgcccagcatcaggatgccaagaagaagatacaggattttaccaaaatg
ctgctcaacaagcttcagcagaggaggatgcaggtccagcagcagcagcaacaacaacag
gcccagcagcaacaggcagcccagcagcaacaacaaagccagcccgcgcagccacccgct
ccagtgcaacctgcccagccggcccagccgcaaccacaaccacaacaacagcaacagcaa
caaccggctgcagcagccaaccaaggcactaccggaggtgtcaccgtcaagacggagccc
aagacggagaacaacaacccgtctgccaccgcagagcctgcccaaacccccactccagcc
ccagcgtctgtgccgactcccactgcgccgcaacaagcgccgcaacaagcgccccagacg
acgcagttcccagaccacatcctcgcccatattagacagatgaccttcaacccgccccag
ggcatcctcgacaaggggcaggagagcgccgtccgatggtccaacgactacaaggccaag
tacctgcgcgccctgatgcagatggaccagcagggcaatcagatgaagagaatcgacgtg
cacatcaagaaccagcaggagaagggcgtgctcggtgccgacgaacagaagcagctccag
atccgaagagaccacgcccagaagatgtacaacgaggctcacagctttgtcaccaatttc
cgtaagagccaggaggctatcaacaaggcaagagcggctgtggcagctgctgccgcagcg
ggacagacggcggcaagtgcggccgcggcaagtgcagcaagtgcaacaggtgcaagtgcg
gccgcggcaggtgcgagtgcgggtgcagcaacgtcacgacctccttcccaggcttcgcaa
caacagcaacaacaacagcagcagcagcagcaaaatagcccggccatcgcgacatctcag
cctccttcaacgcagcctagtgctgttcaagcaagccctgctccgaccgcgcaaaacacc
cccgctatgcagaacgcccagaatcccacgaccgctgtcaacgctgccatcgaagcagct
aagaaccagcagatggccaacgccgccgctggtcgaggcactcctccacagcaacagcaa
cagttgcctccccaacaggcccagcagcatcaacagcaacaggctcaacagcaagcccaa
caacagcagcagcttcagcaacaacaggctcagcagcagcaacagcttcaccaacagcag
cagcagcagcaataccagcaacagcaggctcagcagcaggctcagcagcaggcccagcag
caggcacaggctcaggcagcagctcaagcccaagcctccactccctcggcccagaccccg
actactgctgctcaacctgctcaaatccaacccggtatggcgcaaggccagcatcatcct
ccacctgtcaacaccgccattgcttccgtttctgcaggtgggcttccttcggcaggcact
cccacccagcgcgtcgccactccccagtcggctgttcctcccggtcccggtcaagctctc
agccactcggccgccgtctctcgcgccaaccagcgcatgaactcgcagacctcggccatg
ccctctcagcaacagcagcagcaacagcagcaacagcagcagcaagctactggtactcct
ggctccgccggcgctcacgcacaaggtgtcatgggatccggagccgttccgcaacaacag
cacgcccatcctacccagccgacccagacgctacagtctaagctccccattcctaagcag
ctcccggagaaggcgactgccgtccctcagcccgtcgccatggctggcggtgctggcgct
ggtcgtcctacctacacgggcggtggcggcattgctggaggtgtcatgggacagccagcg
atggctaagatccccgcctatgtccacgaagccgagggtgatcatgttctgagcaagaaa
aagctggacgagcttgtgcgccaggtctgcggcgggaacgctgagggccaggagatcaac
atgctgaccccagaagtcgaagagagcgtcctggccatggccgacagcttcgtcgacagc
gtcctcgagacggcttgccgcaacgccaaggagcgcggctccaaggtcctcgagatccgc
gacatccagctcgtactcgagcgcacctacaacatccgcgttccgggctactcttcggac
gagttgcgcaccgtccgcaagatccagccgtccaccgcctggatcaccaagatgagcgcc
attcaagctgctaaagtcacgtctggcaagggcgagtag
DBGET
integrated database retrieval system
