Colletotrichum higginsianum: CH63R_01391
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Entry
CH63R_01391 CDS
T08176
Name
(RefSeq) PDCD2_C domain-containing protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_01391
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CH63R_01391
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Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
28860473
NCBI-ProteinID:
XP_018164728
UniProt:
H1W2C5
LinkDB
All DBs
Position
1:complement(4724432..4725782)
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AA seq
415 aa
AA seq
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MADYDSDSSEQELTETNVLLGYASKDADEDTISRLGGQPDWLNPELPAPSALARCKICND
IMVQLLQLNGELPERFPGHERRLYVFACRRSTCRRKQGSIRAVRGVRISKDAPTVGAKKV
ETKAPKKPIEEEPKKNDGPGLGSALFGGGGGGSSGAANPFASNANPFSTGASSSSPFSNA
APSSNPFSKPAAEPQQPEQKKAEDPAESLPKTFAETLNLNNPQESSGTPPPPEPWPPADA
LPKAYPISYLADAEFETLDPEPMPVPQNARMEVDNEGGAGATGGDIKDVFESSMDAVFQK
FADRMAQNPEQAIRYEFAGAPLLYSKADVVGKSLGGGGRMPRCGNCGAGRVFEVQMTPHA
ITELEAEELSLEGMDWGTIIVGVCEADCQQRGVEAGEGGYLEEWCGVQWEELSKR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacgatagcgactcctctgaacaggaactgaccgagactaacgtattgctt
ggttacgctagcaaagatgcagacgaggacaccatcagccgtcttggtggccaaccagac
tggctaaaccccgaactgcctgccccgtctgccctcgctcgctgcaagatatgcaacgac
atcatggtccagcttcttcagctcaatggcgagcttcccgaaaggttccctggccacgaa
cgccgcctctacgtcttcgcgtgccgcaggtcgacatgccggcgcaaacagggtagcatc
cgcgctgtcagaggtgtcaggatatccaaggacgcacccacggtcggagcgaagaaggtc
gagacaaaggctccgaagaaaccgatcgaggaggagcccaagaaaaatgacggtccgggc
ctgggcagcgcgctcttcggcggcgggggcggtggtagctcgggcgccgccaatccgttt
gccagcaacgcaaacccctttagtacaggggcctcttcaagcagtcccttcagtaatgcc
gccccatcgtcgaaccccttctccaagcccgccgccgaacctcagcagcccgagcaaaag
aaagccgaggacccggcagaatccctccccaagacattcgccgagaccctcaacctcaat
aacccgcaggaatcttccggcacgccccctccaccggagccctggcccccggctgatgcc
ctgccgaaggcgtaccctatttcttacctcgcggatgccgagttcgagaccctggacccg
gaacccatgcccgtcccccagaacgcgcggatggaggttgataacgagggcggtgctggt
gccacgggtggcgacatcaaggacgtcttcgagtcctccatggacgccgtcttccagaag
ttcgcggaccgcatggcccagaacccggagcaagccatccgttacgagttcgccggcgcg
cctctactgtattccaaggccgacgtcgtcggcaagtcgctcggcggcggcgggcgcatg
ccgaggtgcggcaattgtggcgccggacgagtgtttgaggtgcagatgacgccgcacgcc
atcacggagctcgaggcagaggagctctcgctcgagggcatggactggggcacgatcatt
gtgggtgtctgcgaggcggactgccagcagagaggcgtcgaggccggtgagggcggctac
ctggaggagtggtgcggtgttcagtgggaggagctctcgaagcgatga
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