Colletotrichum higginsianum: CH63R_01400 Help Entry CH63R_01400       CDS       T08176                                  Name (RefSeq) DNA polymerase   KO K02324   DNA polymerase epsilon subunit 1 [EC:2.7.7.7] Organism chig  Colletotrichum higginsianum Pathway chig03030   DNA replication chig03410   Base excision repair chig03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:chig00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CH63R_01400    03410 Base excision repair     CH63R_01400    03420 Nucleotide excision repair     CH63R_01400  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chig03032]     CH63R_01400    03400 DNA repair and recombination proteins [BR:chig03400]     CH63R_01400 Enzymes [BR:chig01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      CH63R_01400 DNA replication proteins [BR:chig03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase epsilon complex     CH63R_01400 DNA repair and recombination proteins [BR:chig03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase epsilon complex       CH63R_01400 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 zf_DPOE_2 TPR_12 RNase_H_2 TPR_2 TPR_14 Ank_2 Motif Other DBs NCBI-GeneID:  28860482 NCBI-ProteinID:  XP_018164737 UniProt:  A0A1B7YW05 LinkDB All DBs Position 1:4747654..4757252 Genome browser AA seq 2887 aa AA seqDB search MPNTSLRRPQKGYRRGGKQAYHGPGQTTRTFAASSRAEATSADEKWERTRLTNTIDENMG FARYEGGKRKEGWLVNVQPTSVEDERIPGGRAALDCYFIEDDGSHFKATVEYEPYFLIAV KKGRESEVEEWLKRVPGGGVVKTIKRVEKEDLKMPNHLMGYRRTFLELRFSNINDLMAAR KDIMPIASKNRKNVDALDAYAEVQTTNGDFDLFDDSRDDDRRANASFADASDFIVDIREY DVPYHVRVMIDMDIRVAKWYFVDVKHGVTKITINEDRLAMADPVVMAYDIETTKLPLKFP DAAIDQVMMISYMIDGQGFLITNREIVSEDISDFDYTPKPEYPGSFMIFNEPDEKAVLER FFLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYQEIGWKKDSEDQYKCSYSVHMD CFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQTLAEYSVSDAVAT YYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQQEIVLPNKHVSPREA FYDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDTGAVDELLKDLDAALKFSITVEEK KSMDDIENYDEIREQIASRLRALKETPNRSERPLIYHLDVASMYPNIMTTNRLQPDSMIQ ESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMIRNALENEKFPGKWPNSPQRTF QDLSPDEQTALLRKRLQIFSQKVYHKIHDSTTTVKEAIICQRENPFYINTVRDFRDRRYD YKGKAKVWKGKTESLKQSGATSSEVDAAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRW YSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPENFAFKTKNGKKV TISYPCTMLNHLVHAKFTNHQYQTLVDPKTLKYETHSDNSIFFEVDGPYKAMVLPTSKEE DKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGETLAECYAAVAK VANQWLDVLHSKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQM VKDKGLNCKFIICARPKNAPVTERAVPVAIFSAEETTKRFYLKKWLKEEPPDTDPRALLD WDYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPDWLQRRINIKDDKMKQKKLTDLFAK GPLEDITNLNGRSAADMEDFGSQLLKPKPVTSVVASSQPAAPTSQKRKSPGPAENADPFA ALPKEMPSPSDDYVGFLQYQKQKWKIQKQARIRRRQLFGDRRGNNQNNIQNTFMKQAHMT FMNTWQLLHLKPTETPGIVNAHVLIDAKIHSLKIKVPRQVFLNLKSGEMPDVDIPGCEVE QVNHTLPNGHSSVHLFKLTVPEDVYFAEADKFSLLFNHPSVEGVYEKHLPLNIRAVLQLG NQCAIDERQHAVLGKGLEQGFDLLGLKRPLKPRTYLETSPLAYIYMSHVTAGDRQIFGVF STLKDEAHVIILQKGRDSGQDLPNISRIYTELLARRGEEAAGTNWQDCFTYQEKLNFKIT QVTTRRKAHLELSDVVKKMRKDELRPLMMVIQSSQRNMLINDVPILGEFPVLPLKYDPAD SSLPPLGWQAVVARRLVGHYLGLGSWIVHLNTLARYGEVPLCNLEREDPRFLIDIAYARR LQNNNVVLWWSAGPRPDHAGHEKDDITGPLETVQMPATNNPGTFSSVCIDLEVRNLAINT ILTSSLINDLEGSESISFNPAGDGNAAGDEVISSEGTFANAGVLVLREMVKSWWQEACKG SAMADVMVQHLVRWVENPDSFLYDRALHYYVQMMSRKAFQQLMADFRRVGSQVIFANSNR LLLQTTKAEVGTAFAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGGKACQEV VEAEQQTLDTVMHWQMATFLPIRLQPTFQDWVIEFIQLMHNLKRPLNGDPSSTPRLTQLP QKSLAEGAEGQIILGKAFEKPLKKDIANLINLQKRELLHPELAEDYSFPHLPGSHLTHLS SRNAVLELVKALMQVLSLDKNITLEARLLRKELLAMFDVREFSKEGAFQNPSESLKVIQL SCDSCTMARDLDFCRDEDLLPEMGPDGKRLSPETRPWRCTFCEAEYDRNAIEEMLLARVE AFVVEWTTQDLKCGKCGALRMNELMDHCTCSGEWVESVRRADIVRRLGVFWNVAKFYGLK MLLEEAFGMRSNSPSARDPFGHLHTLDRRASSHSIGWAVLFTRAYKYGGESLWEFAYKEL DEAGALCDDVSLSDDERRSCHRRFLLQKGAIERRQGDFAEAIRTLEHAISEYGTYDLEHA RMLGELGTAFQRQDSFERADELYAEQHALAIKLAAEAKDQRSVWRAEALAARAIGYRGIM AYMLSVPDLDDNDRTNHEGLSDAINKSMQRVASTRTLLRAIANEDAAFQHEVRATTCICV ALDRLSLCYGAAGNTAEAVNWARETVAEGKAFDPTIQAFGRFFLGLALQRNGDLEEAMQQ WTRHGKGDLETAAIALCRQPSSETLGYMTQLVKHQVPLDHYNEQGYSPLDYAIMGGSETM GALVMKGLRQEYLRNGFTPDETEVLIEMRKTEADRRKEYRSMFQKSFRPLLRTSAAETTK SSSDAQEVSSRAEKCIMGLRQAYSRLLVEQEITRSIFDDFKYIELSDFRSMTRLPQPGSL EDMNTMAKSVQQFGNMLEKQRNGSPFVVFLSYRWLGNGKPDDDQGTQLARMNAALSQFLA THPWLSDDRVAVWLDVGCIHQLDPDIRQRGINALPLIIAQCNAMISLDDSAYHSRAWCSV EVLVMQTLRDSYGLHECWSQMSLSHFERAATRPPIDDKLTGLQLSFPDKDGPTVKFLVRQ SRILAKK NT seq 8664 nt NT seq  +upstreamnt  +downstreamnt atgcccaacacgagcctgcggcgcccccaaaagggctaccgccgtggcgggaagcaagcc taccatgggcctggccagacgacacgcaccttcgcagcctcgagtcgcgccgaagcaacc tcggccgatgagaagtgggagcgcacgcggctgacgaataccatcgacgagaacatgggc ttcgctcgctacgaaggcggcaagcgcaaggagggttggctcgtcaacgtgcagccgacg tcagtcgaggacgagcggataccgggcggccgcgcggcgctcgactgctacttcatcgag gacgacggctcgcacttcaaggccacggtcgagtacgaaccctacttcctcatcgccgtg aagaagggtcgcgagagcgaggttgaagagtggctcaagcgcgtgcctggcggcggtgtc gtcaagacgatcaagcgagtcgagaaggaggacctgaagatgccgaatcacctaatgggc taccgccggacgttcctcgagctgaggttctccaacatcaacgacctgatggcggcgagg aaggacatcatgccgatagcgtccaagaacaggaagaacgtggatgccttggacgcatac gccgaagtccagacgacgaacggcgactttgacctttttgacgactcacgagatgacgat agacgagctaatgcttcttttgccgacgccagcgacttcattgtcgatattagggaatat gacgtgccatatcacgtccgggtaatgatagatatggatattcgagtggcaaaatggtac ttcgtcgacgtcaagcacggcgtcacaaagatcacaatcaacgaagaccggctggccatg gcggaccccgttgtcatggcctacgatatcgagacgacgaagctgcccctgaagttccca gacgccgccatcgaccaggttatgatgatttcgtacatgatcgacggacaaggttttctc atcacgaaccgagagatcgtctcggaagacatctctgacttcgactacaccccgaaaccc gaataccccggctcctttatgattttcaatgagccggacgagaaggccgtcctcgaacgc ttcttcctgcacatcaaggaggcgaggccgacggtcattgcgacgtacaacggtgacttt ttcgattggccttttgtcgaagcccgcgctagcgtcaacggtatcgacatgtaccaggag atcggctggaagaaggacagcgaggaccagtacaagtgcagttacagcgtgcatatggac tgcttccactgggtgaatcgagactcgtatcttccccagggatctcgaggcttgaaggcc gtcacggtggccaagcttggatacgaccctgacgagctcgatcccgaactgatgacgccc tacgccgccgaacggcctcagaccttggccgagtattccgtttccgacgccgtggcgacg tactacctgtacatgaaatatgtccaccccttcatcttctccctctgcacaattctgccc ctgggcggcgacgacacattacggaagggtaccggtactctttgtgagatgctgttgatg gtccaggcttaccagcaggagattgtattgcccaataagcacgtctcgcccagggaagca ttctacgacggtcacttgctagactcagaaacgtacgtcggcggtcacgtcgagagtatc gaagcaggcgtttttcgcgcagatatccccgtcaatttcgcagttgacacgggtgcggtt gacgagttgttgaaggatttggacgccgcgctcaagttcagcatcacagtggaagagaag aagtcgatggacgatattgagaactacgacgagattagagagcagatcgcctcgcgctta cgtgccctcaaagagacaccaaaccggagcgagcgccccttgatttaccatctcgacgtc gcttccatgtaccccaacatcatgacgacgaatcgactccaacccgactccatgattcag gaatcggactgtgcggcctgcgacttcaaccggcccgggaagacgtgtgacaggcggatg ccctgggcgtggcgaggagagtacctgccggcaaagcgcgacgagtacaatatgatcagg aacgcgctcgaaaacgaaaagttcccggggaagtggccaaactcgccgcagcggactttc caggacctttccccggacgagcagacggctctgctgaggaagcggttgcagattttctca caaaaggtctaccacaagatccacgactcgacgacaacggtcaaggaggctatcatctgc cagcgcgagaacccgttctacattaacaccgtccgagacttccgtgatcgtcgttacgac tacaagggcaaagccaaggtctggaaaggcaagacggagtccctcaagcagtcgggcgcg acgtcttccgaagtcgacgcggcgaagaagatgatcatcctgttcgactctctgcagctt gcccacaaggtcattttgaactcgttctatggctacgtcatgagaaaaggatcgcggtgg tactccatggaaatggccggtgtgacttgtctgacgggagcaacaattatccaactggcc cgatcgctcgttgagcgccttgggcgcccgctagagttggataccgacggtatttggtgt atgcttccggccacgttcccggagaactttgcgttcaagacgaaaaacggaaaaaaggtc accatctcgtacccttgtactatgttgaaccatctggtccacgccaagttcacgaatcac caataccagacgctcgtggaccccaagacgctcaagtacgagactcacagcgacaactcc attttcttcgaagtcgacggtccctacaaggccatggtcctgcctacgtccaaggaggag gataagaacttgaagaagcgctacgccgtcttcaacgacgacggtagtctggccgagtta aagggtttcgaggtgaagcgccgaggagagttgaagcttatcaagatctttcagcagcaa atcttcaagttcttcctcgaaggagagaccctggccgagtgctatgctgccgttgccaag gtcgccaaccagtggctggacgtcttgcatagcaagggttcgacactggcggacgaggag ctgatggagctcatttccgagaacagaagcatgtccaagaccctcgaggagtacggttcg cagaaatcgacgtccatcaccacggccaagcgtctggcggatttcttgggtgaacagatg gtcaaggacaaggggctcaactgcaagttcatcatctgcgcgaggccgaaaaacgcccct gtcaccgagagagccgtacccgttgccatcttctccgccgaggagacgacgaagcgtttc tacctgaaaaagtggctgaaggaggaacctcccgataccgacccgagagctctcctggac tgggactattaccttgagcgtctggggtccgtcatccagaagctcatcaccattccggcc gcgctccagaaagtcaggaaccccgtcccccgcgtcgcccatcccgattggctccagcgc agaatcaacatcaaggacgataagatgaagcagaagaaactcacggatctgttcgccaag gggcctctagaggacatcaccaacctcaacggtcgatctgcggccgacatggaggacttt ggtagccagcttctgaagccgaaaccagtgacctcagtggtggcctcgtcgcagcctgct gctcccacttctcagaagcgaaagtcgcctggacctgctgagaatgccgatcccttcgct gccctgcccaaggagatgccctcaccttcagacgactacgtcggctttctgcaataccag aaacagaagtggaagatccagaagcaagcgcgcatccggcgacgacagctcttcggagac cggcgcggcaataaccagaacaatattcagaacacgttcatgaagcaggcgcacatgacc ttcatgaacacgtggcagctcctacatctcaaaccaacggagacacctggcatcgttaac gcacacgtcctcatcgatgcgaagatccactcgctcaagatcaaggtgccgcgacaggta ttcctgaacctcaagagcggagaaatgccagacgtcgacatcccgggatgtgaggtcgag caagttaaccatacgctaccgaacgggcattcatcagtccatcttttcaagctgaccgtc cccgaggatgtctatttcgccgaggccgacaaattctcgctgctgtttaaccaccccagc gtcgagggcgtgtacgagaagcatctgcctctgaacatccgtgctgttcttcagttgggc aaccagtgcgccatcgacgagcggcaacacgcggtgcttggaaagggtctcgagcaaggg ttcgacctgctcggcctcaaacgtcccttgaagccccgtacctacctcgagacctcgcca ctcgcgtacatctacatgtcccacgtcactgcaggcgacagacagattttcggagtcttc tcaacactgaaagacgaagcgcacgtcatcatcttgcagaagggcagagattcaggacaa gacctccccaatatctcacggatctacaccgagctgctggcgcgacggggagaggaggca gcgggcaccaactggcaggactgcttcacgtaccaggaaaagctgaacttcaagatcacg caagtgacgactcgacgaaaggcgcatttggagcttagcgacgtggtcaagaagatgagg aaggacgagctgcggccactgatgatggtcatccagtcgtctcagcgcaacatgctcatc aacgacgtccccatcctcggcgagtttcctgtactgccgctcaagtacgaccccgccgac agctctctcccaccgctcggctggcaagcagtcgtggccagacgacttgttggacactac cttggtcttggctcctggatcgtgcatctgaacaccctcgcgcggtacggcgaggttcca ctctgcaacctcgagcgagaagacccccgcttcctcatagatatcgcgtacgctaggcgg ctgcagaacaacaacgtcgtgctgtggtggtccgcgggccctcggcctgaccacgctggc cacgagaaggacgacatcaccggacctctggaaaccgtccagatgcccgcgaccaacaac cctggcacgttctcgtcggtctgtatcgatctggaagtcagaaacctggccatcaacacg atattgacatcctccctgatcaacgacttggaagggtcggagtccatctcgttcaacccc gctggagatggaaacgcagcaggggatgaagtcatctcttcggagggcacctttgcaaat gccggtgtcctggtgctgcgcgagatggtgaagagttggtggcaagaagcctgcaagggc agcgcgatggccgacgttatggtccagcacctcgtccgctgggtcgagaaccccgactct ttcctgtatgaccgcgcgctgcactactacgtgcagatgatgtctcgcaaagccttccag cagctcatggccgacttccgtcgcgtcggttcgcaggtcatctttgccaactccaaccgt cttctcctgcagacgaccaaggccgaggttggcaccgccttcgcctacagtcagtacatc atcaaatcgatcaagagcaagccccttttccacttcatcgaccttgagatcaaagaatac tgggactacctggtgtggtacgatgagttcaactacggaggcaaagcctgtcaggaggtc gtggaagcggaacaacagactctcgacaccgtcatgcactggcagatggccaccttcctt cccatccgcctgcagccgacgttccaagactgggtcattgagttcatccagctcatgcac aacctcaagcggcctctgaacggagacccctcctcgacgccgcgccttacccagctcccg caaaagtctctcgccgagggcgccgaggggcagatcatcctcggcaaggcttttgagaag cccctgaagaaggacatcgccaacttgatcaacctgcagaagcgcgagctcctccaccca gagctggcggaggactactccttcccgcacctgcccgggtcacaccttacgcacctctca tcgcgcaacgccgtgctcgagcttgtcaaggcgctgatgcaggtgctctcgctcgacaag aatatcacgctcgaggcgcgcctactgcgcaaggagctgctcgccatgtttgacgtgcgc gagttcagcaaagagggagcgttccagaacccaagcgagagcctgaaggtgattcagctc agctgcgacagctgcacgatggcgcgcgacctcgacttctgcagggatgaggatctgttg ccggagatggggccggacggcaagcgcctgagcccggagacgcggccgtggcggtgtacc ttttgcgaggctgagtacgaccgcaacgccatcgaggagatgctgctggcgcgggtagag gcgttcgtggtggaatggacgacgcaagatcttaagtgcggcaagtgcggcgcgctgagg atgaacgaactcatggatcactgcacctgcagcggcgagtgggtggagagcgtgcggagg gcggacatcgtgaggcggctgggagtgttttggaacgtagccaagttttacgggttgaaa atgctgttggaggaggcattcgggatgcgaagcaactctccgagtgctcgagatcctttc ggccatctccacactcttgacagaagagctagctcgcattccatcggctgggcagtcttg ttcaccagagcctacaagtatggcggtgagtcactgtgggagttcgcatacaaggagctt gacgaagcgggagcattatgcgacgatgtctcgctatccgacgatgagcggcggtcctgc cacaggcggttcttgcttcaaaaaggcgccatcgagcgcagacagggcgatttcgcagaa gcaataagaacgctagagcacgccatcagcgagtatggcacctacgatctggaacacgcg cggatgctcggtgaactcggcactgccttccagcgacaggactcgttcgagcgtgcagac gagctctatgccgaacagcatgcactcgcgatcaaactggccgctgaagcgaaagaccag cggtctgtttggcgtgccgaggctcttgccgcaagagcaatcggctatcgtggcatcatg gcttacatgttgagcgtaccagatcttgacgacaatgatcggacgaaccacgaaggcctg agcgacgcgatcaacaagagcatgcagcgcgtggcgagtacccgaacgctgttgcgggct atcgccaacgaagatgctgcgttccagcatgaagtcagagcaacgacttgcatctgcgtt gcattggatcgtctctcgctttgctatggagctgctggcaacacagcggaggctgtcaat tgggcacgggaaactgtggcggaaggcaaggcctttgatcccaccatacaggctttcggc agattctttctcggtctggccctgcagcgaaacggggatctggaggaagccatgcagcaa tggaccaggcatggaaagggtgatctcgagacagccgccattgccttgtgccgtcagcct tctagcgaaacgttgggttatatgacacagcttgtgaagcaccaagtcccattggatcac tacaacgaacaaggatacagtcctctagactacgccatcatgggcggtagcgagactatg ggagcgctcgttatgaaaggccttcgtcaggagtatctgaggaatgggttcacaccagat gagacggaggttctgattgagatgcgcaaaactgaggccgatcgcaggaaggagtatcga tcgatgttccaaaaatctttccgtccgttgctcagaaccagtgctgccgagacaaccaag agctcttcggacgctcaagaggtctctagtcgagctgagaagtgcataatgggtctgcgg caagcttattccaggctactcgttgagcaagagatcacgcgatcgatatttgacgacttc aagtacatcgagctatccgactttcggtcaatgactaggctgccgcagcctggcagcctg gaggacatgaacacaatggcaaaatctgtccagcagtttggaaacatgcttgaaaagcag cgaaatggaagcccatttgtagttttcctatcataccgatggcttggcaatggaaagcca gatgatgatcaaggaactcagctcgctcggatgaacgcagccttgagccaatttctggca acccatccctggctgagcgatgaccgagtggctgtctggctggacgtcggctgcatacac caactcgacccagacatcagacaacgaggcatcaacgcactaccactgatcatcgcccag tgcaacgccatgatcagcctcgatgactccgcctaccactcccgtgcctggtgctccgtc gaagtgctggtcatgcagactctccgagattcgtacgggctacacgagtgctggtctcag atgtcgttgtcgcatttcgaacgagcagcgaccagaccgccgatagacgacaaactgacg ggcttgcagctcagcttcccagacaaagatgggccaactgtcaagttcctggtgaggcag agtaggatcttagctaagaagtaa

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