Colletotrichum higginsianum: CH63R_01812
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Entry
CH63R_01812 CDS
T08176
Name
(RefSeq) Protein DOM34-like protein
KO
K06965
protein pelota
Organism
chig
Colletotrichum higginsianum
Pathway
chig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CH63R_01812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_01812
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CH63R_01812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
28860894
NCBI-ProteinID:
XP_018161603
UniProt:
H1W525
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All DBs
Position
2:complement(127204..128516)
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AA seq
400 aa
AA seq
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MKLVPTKASTDIGEDAVTLLPEDSEDMWHAYNLISPGDLVMAHAVRKVVQETKTGSTISE
RVHTVLAIQVKSTFFDPIVGQLQVSGTVKSENAYVSLGQYHTLDLEVSRPFTISKPEGWD
SVAKDTLSESLSDDKDGAMAAVVMQEGIANICLISQFRTVIKQRVESVIPKKRSAASETS
QGMRRFYDKTLTALLRTVNFDTPRPLLLASPGFVAADFKKYIADEGRDKSDKKLSGIAKE
AIVIHTNSGHVHSLNEVLKSPEMGTKLKDFKFTKETKLMDQFFDRLRLEDGRAWYGASAV
AKAVNEGAIGPGGGVLIMNNSLFRSSDIPTRKKYVALVDKVRADGGDVRILSSDHESGQR
LDMLGSIAAILSYPIHDLDEDEDEDDGETAAGDAGGETII
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttccaaccaaggcgtcgaccgacattggcgaagatgccgttactctccta
cctgaggactcagaggacatgtggcatgcctacaacctcatcagccccggcgacctcgtc
atggcgcatgccgtgcggaaagtcgtacaagagaccaagaccggcagcaccatttctgag
cgagtccacaccgtccttgcgatccaagtcaagagcaccttcttcgaccccatcgttggc
caacttcaggtcagcggcaccgtcaaatccgagaatgcctacgtcagcctcggccaatac
cacactctcgatctcgaggtctcgcgccccttcacgataagcaagcccgagggctgggat
tcggtcgccaaggatacactgtccgagagtctgtcggatgacaaggacggcgccatggcc
gccgttgtcatgcaggagggcatcgccaacatttgcctcatcagccagtttcgcactgtc
atcaagcagcgcgtcgagagcgtcatccccaagaagcgaagcgccgcctccgaaacatct
cagggaatgaggcgcttctacgacaagaccctgaccgcccttctccgaaccgtcaacttc
gacacgcccaggccgctcttgctagcgagtccgggatttgtcgcggccgatttcaaaaag
tatattgcggacgagggaagagacaagtcggacaagaagctgtcagggatcgccaaggag
gccatcgtcatccatacaaattcgggccatgtgcacagtctgaacgaggtcttgaagagc
ccggagatgggcaccaagctgaaggacttcaagtttacaaaggagaccaagttgatggat
cagttctttgacaggctacgactggaagacggacgggcgtggtacggagcctcggctgtg
gccaaggccgtcaacgagggtgccatcggccccggcggcggcgtcctcatcatgaacaac
tccttgttccgcagctctgacatcccgacaaggaaaaaatacgtggcgctggtggacaag
gtaagggcagacggtggcgatgtcagaatccttagcagcgatcacgagagcggccagaga
ctcgacatgctaggcagcatcgccgccatcctgtcatacccgatccacgatttggacgag
gacgaggacgaggacgacggggagacagcagccggagatgcgggcggagagacaattata
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