Colletotrichum higginsianum: CH63R_01952
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Entry
CH63R_01952 CDS
T08176
Name
(RefSeq) Snf7 family protein
KO
K12191
charged multivesicular body protein 2A
Organism
chig
Colletotrichum higginsianum
Pathway
chig04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CH63R_01952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_01952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_01952
Membrane trafficking [BR:
chig04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
CH63R_01952
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CH63R_01952
Exosomal proteins of other body fluids (saliva and urine)
CH63R_01952
Exosomal proteins of colorectal cancer cells
CH63R_01952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
SR_plectin_7
CaMBD
DUF4347
Ist1
CCAP
Motif
Other DBs
NCBI-GeneID:
28861034
NCBI-ProteinID:
XP_018161743
UniProt:
A0A1B7YME9
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All DBs
Position
2:646937..647852
Genome browser
AA seq
224 aa
AA seq
DB search
MNILEYMFGKRMTPAERLRKNQRMLDKAIRELDQVRVKLEKQEKQLITQIKQSAQKGQMG
ACKIQAKDLVRTRRYIEKFYGMRSQLQKISLRLQTYRTNEQMMTAMKGATQALGTMNRSM
NLPALQRIAMEFERENDIMDQRQEMMDDVMDDAMDVGADEEGEEVVEQVLEEIGVDLTSA
LGETPSGMQTAAVPESRVAQAVGGGGGGDPGDDALQARLDSLRR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttggagtacatgttcggcaagcgcatgacgcctgcggagcgtctgcgcaag
aaccagcgtatgctggataaggcgatccgtgaattggaccaggtccgcgtcaagttggaa
aagcaggagaagcagttgatcacacagatcaagcagagtgcccagaagggacaaatgggc
gcttgcaagatccaggccaaggatctggtccggacacggagatacattgagaagttctac
ggcatgcgcagccaactgcagaagatctcgctccggcttcagacataccgcaccaacgaa
cagatgatgacggccatgaagggggcgacccaggccttgggcacgatgaaccgatcgatg
aacctccccgctctccagcgcatcgccatggagttcgaacgcgagaacgacattatggat
cagaggcaggagatgatggacgatgtcatggacgatgccatggacgtcggcgccgatgag
gaaggcgaagaggttgtggagcaggtattggaggagattggagtcgatttgacgtcggcg
ctcggagaaacaccgtctggaatgcagacggcggcggttccggagagccgagttgctcaa
gcggttggcggaggtggaggtggggatcccggcgacgacgccctccaggcccgccttgac
agccttcgacggtag
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